Gene Sked_00450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00450 
Symbol 
ID8631684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp45119 
End bp46165 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content72% 
IMG OID 
ProductZn-dependent alcohol dehydrogenase 
Protein accessionYP_003312855 
Protein GI269793400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.147294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0391491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTG TCGTGTTCAC GGACTACAAG ACCTTCCCGT CGCTCCAGGA GGTCGACAAG 
CCGTCACCCG GCCCTGGCGA GGTCCTGCTC AAGGTCGCCG GCGCGGGCGC CTGCCACTCC
GACGTGTCGA TCTACAGCCA CTTCGAGGAG GGTCAGCCCG GCGCGCAGAA GCCCGGCTTC
GTCCTCGGCC ACGAGAGCTC CGGCTGGGTC GAGTCCGTCG GCGAGGGCGT CTCCGGCTTC
GAGGTCGGCG ACGCGTACCT CGTGTACGGC CCGATCGGCT GCGGCCACTG CGCGGCGTGC
TCGCGCGGCC AGGACACCTA CTGCGAGAAC GCCGCCACCA TGCCCTACCT GGGCACCGGC
CTGGGCCGCG ACGGCGGCAT GGCCGAGTAC GTCACGGTCC CCGCGCGCAA CCTCGTGCCG
CTCGGCGACT CGGACCCCGT GACCGCCGCA CCGCTCGCCG ACGCAGCCCT CACGCCGTAC
CACGCGATCA AGCTCTCCCT GCCGAACCTC GCGGGCGGCG GGCGCTACGC CCTCGTCGTC
GGCCTCGGCG GGCTCGGGCA GATCGCGGTG CAGATCCTCA CGGCGATCAC CGGCGCGACC
GTCATCGCCA CGGACATGAA GCCCGAGGCC ATGGAGAAGG CCGCCGCTGC TGGCGCGATC
ACCGTCCCGA GCGGTCCGGA CCAGGCCGAC CGCATCCGTG AGATCACCGG GGGCAAGGGC
GTCGACGCGG CCTTCGACTT CGTCGGGGTC ACCCCGACCA TCGGACTCGC ACGCTCCGTC
ATGGCGCAGG GCTCGCGCCT CACAGTGGTC GGCATCGCCG GCGGCACCGC CGAGTGGTCG
TTCTTCACGA CGCCGTACGA GTCGGTCATC ACCAACACCT ACTGGGGCAC GATCGAAGAG
CTCCACGAGG TCGTCGCGCT GTACCGCGAC GGCAAGATCG CGCCCGAGGT CGAGCGCTTC
GCCCTCGCCG ACGCCCTCGA CGCCTACCGG AAGATGGAGG CCGGCGAGCT CACCGCCCGC
GCGGTCGTCG TGCCGCACGG CGCGTGA
 
Protein sequence
MQAVVFTDYK TFPSLQEVDK PSPGPGEVLL KVAGAGACHS DVSIYSHFEE GQPGAQKPGF 
VLGHESSGWV ESVGEGVSGF EVGDAYLVYG PIGCGHCAAC SRGQDTYCEN AATMPYLGTG
LGRDGGMAEY VTVPARNLVP LGDSDPVTAA PLADAALTPY HAIKLSLPNL AGGGRYALVV
GLGGLGQIAV QILTAITGAT VIATDMKPEA MEKAAAAGAI TVPSGPDQAD RIREITGGKG
VDAAFDFVGV TPTIGLARSV MAQGSRLTVV GIAGGTAEWS FFTTPYESVI TNTYWGTIEE
LHEVVALYRD GKIAPEVERF ALADALDAYR KMEAGELTAR AVVVPHGA