Gene Sked_00330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00330 
Symbol 
ID8631672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp33710 
End bp34624 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003312843 
Protein GI269793388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.531846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGG ACGCGCGAAG ACTTGGTGTA CTCCTGGCGG TCCACAGGGC TGGAGGAGTG 
GTGGCAGCCG CCGACCTGCT GCACCTGACG CCCTCCGCGA TCTCCCAGCA GATCGCCAAG
CTCGAGGCAG AAGAGGGCGT CGAGGTCCTG CACCGCGGCC CCCGCGGGGT GACCCTCACG
GCCGTCGGGC TGATGCTCGC CGAGGCGGCC GAGCGCATCG AGTCCGAGCT CGTCGAGGCC
CGCAAGCAGA TCGCCACGAT CGGGCCGGAC GTGAGCGGCC GGGTGACGAT CGGTGCGTTC
CAGACCGTGA CCCGCAGCGT GGTCGCGCCC ATGCTGGTGG AGCTCGCGGA GACCGCGCCG
GGCCTCGAGA TCGACGTCCA CGAGGTGGAG ACCGACGACG CCAACCGCGG GCTGCGCAGC
GGCGAGTACG ACATCGCGAT CGTCGAGCAC GACTCCTCGG CCGAGCGCCC CGTGCCGCGC
GGCTTCCGCG AGGTCCCGCT GCTCGACGAG CCGTGGCGCA TCGCCGTGCC GACCACGATG
GCCACGCCCA CGAGCCTCCA GGACCTCACC GAGGCCGTGT GGATCGGCTC GGAGAAGACC
ACGGCGGCGG CCCGGGCGCT GTCCCGCGTG GTCGACCTCG CACGCCCCAC CCGGTCGACG
CTGCACAGCA CCTACAGCTA CGAGGTCGCC ATCGCGCTGG TCGCCGCGGG TCAGGGCGTC
GCGCTGCTCC CGGCGCTCGC CCTCGAGCAC GCCGACCTCA CGGGCGTCGA CATGGTGCCC
ATCGCCGGCC TCGGCATGCG CCACATCGCG GCCCGCCACC GCGCCAACCG CCACGAGCCG
ACGCCCGCCG TGACAGCCGT CATCGACGCG CTGCTCGCAC AGGTGGTCAC GCTCGACCTG
GGGTACATCG GGTGA
 
Protein sequence
MALDARRLGV LLAVHRAGGV VAAADLLHLT PSAISQQIAK LEAEEGVEVL HRGPRGVTLT 
AVGLMLAEAA ERIESELVEA RKQIATIGPD VSGRVTIGAF QTVTRSVVAP MLVELAETAP
GLEIDVHEVE TDDANRGLRS GEYDIAIVEH DSSAERPVPR GFREVPLLDE PWRIAVPTTM
ATPTSLQDLT EAVWIGSEKT TAAARALSRV VDLARPTRST LHSTYSYEVA IALVAAGQGV
ALLPALALEH ADLTGVDMVP IAGLGMRHIA ARHRANRHEP TPAVTAVIDA LLAQVVTLDL
GYIG