Gene Sked_00220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00220 
Symbol 
ID8631661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp24874 
End bp26397 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content73% 
IMG OID 
Productserine/threonine protein phosphatase 
Protein accessionYP_003312833 
Protein GI269793378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.682874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CCTTGCGCTA CGCCGCGCTG TCCGACGTCG GGCTCGTGCG CTCCAACAAC 
CAGGACTCCG CCTACGCGGG GCCGCACCTG CTGCTCGTGG CCGACGGCAT GGGCGGGCAC
GCCGGAGGCG ACATCGCGTC CTCCCTCGCG GTGGCCTCGC TCGCCCCGCT CGACGGAGAG
GCCTTCGGCT CGTCGGAGAT CCTCGAGCGC CTCGGAGAGG CGATCGAGAC GGCCCGCCTC
GAGCTGGTGC GCCGGGCCCG TGAGGACTCC GAGCTCTCCG GCATGGGCAC CACGGTCACG
GCGCTGCTGC GCTCCGGGAA CAAGCTCGCC ATGGCCCACA TGGGCGACTC CCGCGGCTAC
CTGCTGCGCG CCGGGTCCCT GAGCCAGGTC ACCAAGGACC ACACCTTCGT GCAGCACCTG
GTCGACACCG GGAAGATCAC CGCCGAGGAG GCCGAGCACC ACCCGCAGCG CTCGGTCGTC
ATGCGGGTCC TCGGCGACTT CGACCTCGAC CTCAGCCCCG ACCTCTCGGT CCGCGAGGCG
CACCCCGGCG ACCGCTGGCT GCTCTGCTCC GACGGCCTCA GCGGCATGGT GAGCCTCGAG
ACCATCGAGC GGACCATGGT CGAGAACACC GACGTCACCG CGTGCGCCGA GCGCCTGGTG
CAGCTCGCCC TGCGGGCCGG CGGCTCCGAC AACATCACCT GCATCGTCGC GGACGTCGTC
GACCTCGACG ACCTGCCCGA CGGCGCCGGC CCGGACTCGA GCGTCCAGGT GGTCGGCTCG
GTCGCGGCCA CCCGGGACGC GCCGACCGCG GCCCTCGACG GTCCGGCGGC GCGTGCCGCC
GCCCTGCTCG CCGAGGCACG TGCGACCGTC GGCGCCCTCG CCGAGTCGTC CCAGCAGAAC
GTCGCGGCAC CTGTCGAGAG CACCGAGGAC GAGGCACCGG CCGAGGTCGC GACCGAGCCG
GCCCGGCTCT CCCGGTCCGA GGCGAAGGCC GCTCGCGCGC AGGAGCGCGC CGAGGCCAAG
GCGGCGAAGG CCGAGGCCAA GCGCGGCACC GGCATCACCT CGGCGGAGCT CGAGGAGGAC
TCCGGGCGGG GACGCTGGGT CTGGACCGTC GTGTCGCTCG TGGTCCTGCT CGCCATCGTC
GGGACCGGCG GGTACTTCGG GTACCGCTGG ACGCAGACCC AGTACTACGT GGGGATCGCC
GACGGGCGCG TGACCATCTA CCAGGGGATC TCGCAGTCGA TCGGCCCCCT CGAGCTCTCC
GAGGTCTACG AGACCTCCGA GGTCGCCGTC TCAGACCTCG ACAGGTTCGA GATCAACCAG
CTCGAGCGGA CCATCCGCGC GAAGTCCCTC GAGGACGCGC GGCAGCGGGT CGCCGACCTC
GCCCCCGACG AGCCCACGAG CGGCACAGAC AGCACCGACG GCTCTGACGA GCCGACCGAG
ACAGCAACGC CCACGGACGA GGCCTCGGCC TCCGCGGCCG GTGACGCCGC CGACGGCCCG
ACGCCCGCAG GTGGCACCTC CTGA
 
Protein sequence
MTIALRYAAL SDVGLVRSNN QDSAYAGPHL LLVADGMGGH AGGDIASSLA VASLAPLDGE 
AFGSSEILER LGEAIETARL ELVRRAREDS ELSGMGTTVT ALLRSGNKLA MAHMGDSRGY
LLRAGSLSQV TKDHTFVQHL VDTGKITAEE AEHHPQRSVV MRVLGDFDLD LSPDLSVREA
HPGDRWLLCS DGLSGMVSLE TIERTMVENT DVTACAERLV QLALRAGGSD NITCIVADVV
DLDDLPDGAG PDSSVQVVGS VAATRDAPTA ALDGPAARAA ALLAEARATV GALAESSQQN
VAAPVESTED EAPAEVATEP ARLSRSEAKA ARAQERAEAK AAKAEAKRGT GITSAELEED
SGRGRWVWTV VSLVVLLAIV GTGGYFGYRW TQTQYYVGIA DGRVTIYQGI SQSIGPLELS
EVYETSEVAV SDLDRFEINQ LERTIRAKSL EDARQRVADL APDEPTSGTD STDGSDEPTE
TATPTDEASA SAAGDAADGP TPAGGTS