Gene Sked_00120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00120 
Symbol 
ID8631651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp12888 
End bp13967 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003312823 
Protein GI269793368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.472033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACG GAATCAAGGG CTCGGCCAAG GCTACGAGCG ACAAGATCGA CACCGACAAG 
ATCAAGGACC AGGCCGCTGA CCTGGCGTCG GTCCTCTCTG ACGGTGCGCA CCAGGCCGGC
GAGAAGGCGA CCGTCGTCGC CGGGCAGGCC CGCGAGGCTG CGCTGCAGGC CAAGGACTGG
GGCACCCCGA AGGTCGAGGC CTTCGTCGAG TGGGTCACGC CGCGCCTCGA GCAGGCCTGG
AACGAGTCGG TCAAGGCTGC TGCCCCCGCC GTCGAGAAGG CCGCCGGCAA GGCCTCCCCC
GTCATCGACA GCGCGCACGA CAAGCTCGTC GACGATCTGT TCCCCAAGAT CGTCGCCGCG
CTCAACGACG CCGCCAAGAA CGCCGCAGAC GCCACCCGCA CCGCTGCCGA CGCCACGGGT
GAGGGTGCGA GCATCGTCGC CTCCAAGGCC TCCGCCGGTG CGTCGCACGT GGCCGAGTCG
ATCAAGGCCG CCTCGGAGAA GGCACCGATC AAGCTCTCCG ACGCGGTCCA CGCGGTCGAG
AAGCACACCA AGAAGAAGCA GAAGAAGTCC GGCAAGGGCT GGTGGGTCGT CGCAGGCGTC
GCCGCTGCGG GCGGGGCTCT CGTCCTGTGG CGCCGTGCCC AGCCGACCAC GGACCCGTGG
GCCGAGCCGT GGGAGAAGGT CGACTCCAGC ACCGCGGACC AGGCCGAGCG CGCCGTGGGC
GACGCTGCCG AGGCCGTCGG CGAGGCTGCC GGAGCTGCCG TCGCCAAGAC CCGCGAGGTC
TCGGGCAAGG TCGCCGACAA GGCCGAGGAC CTCTCGGAGA AGGTCGCCGA CAAGCTCTCC
GAGGCCAAGG CCACCGCCAA GAAGACGACC TCGCGCGCGA AGTCGTCCGC ACAGTCCGCC
GGTGAGGACC TCGCCGAGGC TGGCGAGAAC GCTGCCGACT CCGCCAAGAA GGCGGGCGAG
GCCGTCGCCA CGAAGATCGG CGAGAAGACC GCCGACGACG AGGACCAGGC CGTGAACAAG
GCCGGCCAGA ACGCCCCCGA CTCCCACGAG TCCACCGGCA CCGAGGGCAC CAGCAAGTAG
 
Protein sequence
MLDGIKGSAK ATSDKIDTDK IKDQAADLAS VLSDGAHQAG EKATVVAGQA REAALQAKDW 
GTPKVEAFVE WVTPRLEQAW NESVKAAAPA VEKAAGKASP VIDSAHDKLV DDLFPKIVAA
LNDAAKNAAD ATRTAADATG EGASIVASKA SAGASHVAES IKAASEKAPI KLSDAVHAVE
KHTKKKQKKS GKGWWVVAGV AAAGGALVLW RRAQPTTDPW AEPWEKVDSS TADQAERAVG
DAAEAVGEAA GAAVAKTREV SGKVADKAED LSEKVADKLS EAKATAKKTT SRAKSSAQSA
GEDLAEAGEN AADSAKKAGE AVATKIGEKT ADDEDQAVNK AGQNAPDSHE STGTEGTSK