Gene Sked_00040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00040 
Symbol 
ID8631643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4478 
End bp5722 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content74% 
IMG OID 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003312817 
Protein GI269793362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCT CTCACCTCTC GCTGCTCGAC TTCCGCTCCT ACACGCAGGT CGACGTCGAG 
CTCGAGCCCG GGGTCACGAC CCTCGTCGGC CCGAACGGCC AGGGCAAGAC CAACCTCGTC
GAGGCCCTGG GGTACGTGGC GACGCTGGGC AGCCACCGCG TCTCCTCCGA CGCCGCGCTC
ATCCGGGCCG GGGCGTCTCG CGCCGTCGTG CGCACCAGGA TCGTGCGGGG CGACCGGGCG
AGCGTCGTCG AGATCGAGAT CGCCCAGGGT CGGGCCAACC GTGCGCAGCT CAACCGCTCC
CCCGTGCAGC GCCCCCGCGA CGTGCTGGGG ATCGCCCGCA CGGTGCTGTT CGCCCCGGAG
GACCTCGTCC TGGTCAAGGG GGACCCGGAC GCGCGCCGCC GGTTCTTGGA CGACCTCACC
GTGCTGCTGC TCCCCCGGAT GGCCGGCGTG TTCTCGGACT ACGAGCGCGT CCTGCGCCAG
CGCAGCGCAC TGCTGAAGTC TGCCGGTGCC GCGCGACGGT CCTCCAACCC GCCGGACCTG
CGGACCCTCG ACGTCTGGGA CGCCAAGCTC GCACAGGTCG GCGCGCAGAT CGTCGCGGTA
CGGCTCCAGC TCGTCGCGGC ACTCCGGCCG CACGTCGCCG TCGCCTACGA CCAGGTGAGC
TCGGGGCAGG GCCACGCGGA GATCGCCTAC AGGTCCTCGC TCGATGCGGT GCTCTCGGGC
GTGGACGACC GGTCGATCTC CGGGCTCGCG GCAGAACCCG TGCCGGCACC GGACGCCGGT
GCCGGAGCGC CGTCGTCAGA GCACCTCGAG GCCCGGCTGC TCGAGGCGCT CGCCGCCGTC
CGCCCCAAGG AGCTCGAGCG GGGGGTCTGC CTGGTCGGGC CGCACCGCGA CGACCTCACG
CTCACGCTCG GCGGGCTCCC CGCCAAGGGG TACGCGAGCC ACGGCGAGTC GTGGTCCTTC
GCGCTGGCGC TGCGGCTCGC GTCGTACCGC CTGCTCACGG ACGGGCCAGA CCCGTCGACG
GCGGAGGCCG CCTTCTGGTT CGCCGACACC GGCCCGGACA CCGAACCGAT CCTCGTGCTC
GACGACGTCT TCGCCGAGCT CGACTCCCGC CGTCGTGGCC GGCTGGCGGA GCTCGTGGCC
GGAGCGAGCC AGGTGCTCAT CACGGCGGCT GTCGGCGAGG ACATCCCCGC GCAGCTCGAC
GGCGCACGGC TCGCGGTGTC CGGGGGGACG GTGACCCGTG CCTGA
 
Protein sequence
MHVSHLSLLD FRSYTQVDVE LEPGVTTLVG PNGQGKTNLV EALGYVATLG SHRVSSDAAL 
IRAGASRAVV RTRIVRGDRA SVVEIEIAQG RANRAQLNRS PVQRPRDVLG IARTVLFAPE
DLVLVKGDPD ARRRFLDDLT VLLLPRMAGV FSDYERVLRQ RSALLKSAGA ARRSSNPPDL
RTLDVWDAKL AQVGAQIVAV RLQLVAALRP HVAVAYDQVS SGQGHAEIAY RSSLDAVLSG
VDDRSISGLA AEPVPAPDAG AGAPSSEHLE ARLLEALAAV RPKELERGVC LVGPHRDDLT
LTLGGLPAKG YASHGESWSF ALALRLASYR LLTDGPDPST AEAAFWFADT GPDTEPILVL
DDVFAELDSR RRGRLAELVA GASQVLITAA VGEDIPAQLD GARLAVSGGT VTRA