Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_4182 |
Symbol | |
ID | 8593910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013518 |
Strand | - |
Start bp | 39845 |
End bp | 41623 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | Polypeptide-transport-associated domain protein ShlB-type |
Protein accession | YP_003310944 |
Protein GI | 268793225 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0159904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA GTATAATATT AGCATTTTTT TTATTAGGAA GCATTGTATT TTCAGCAGGA GTGGGAGATA TAATAGAAAG AAATAATGCT GCGATAGAAA ATGAAAGAAG ACAGCAGGAA TTAGAGAGAA GACAAAGGGA GTTAGAACGT GAAAATTTTG GAAAAGAACC TCAAATAATA GATGGTACTG ATGAGGTCGA TACAAGTGTA AGGTTCTTTA TCAGAAAGAT AGAAGTGCAG GATGAATATA ATCTTCTGAA TAAAGCTGAG ATAAAAGCCG TAACGAAGAA ATATCTGAAC AGAAAGCTGA GCTCCAAGGA TATAAACAAA CTTATGACAG ATCTTAATAA TAAATATATA GAAAAGGGAT ATATAACAAC AAGGGTAAGG CTTGACGAAA CACAAAACCT AAGTGAGGGA ACGATAAGAC TGATAACTCT GCCCGGAACA GTAGAGGGAG CGAGCCTGAA TGAAAATACC TTCTCTGACA GGATGAAGGT ATTTATGTCA GTTCCAAAGA ATAAGAAGAG AATATTAAGA TTACAGGATA CAGAACAGGC AACAGATCAG TTTAACAGGG TATCAAGTAA TAATGTAGAG ATAAAAATAG CACCAGGACA GGAAGCAGGA GGCTCTATAC TACAGATAGA AAACCAGCAG AGCAGGACAT TCAGTGCAAA TATCTCATAT AATAACTATG GAGATGAATC AACAGGAAGA GACAGAGCAA AGATAGATAT TACGAAGGAT AATCTTTTGG GAATAAATGA CAGTTTTTAT GCTTCATATC AGAGAGGGAG GAATAAGAGA CCCTTGAGAA ATGATTATAC AGGCTCGTCA TCAATACCGC CGGGAACGAT AATCAAGGAT AAGGATGATC TTCTTCCAGC AGATACAGAA GCGGAACCGG AAAAGTTCAA TGAGGACTGG TCATTGAACT ATTCATTTCC GTTCAGATAC TGGACATTCA GTACAGGCTA CAGTCATTCC TACTATATAA GCAGCAGTGA AGGATATAAC GGACTGTATG ATACAAGCGG GAGATCAACC CAGTTTAATC TGAATGCAGA CAGAGTGGTA TACAGAAATA AAATGAGTAA GATAAGTATA AACGGAGGAC TAAAGCTAAA GACAAACCAG AATTACTTTG AAGATGTCCA GCTTGTAGAC AGGAGACTGA CAATAGGAAG TCTTGGAATA AATTACAGCA GAGGCTTCTT TGGAGGAATA CTGGGATTTG ATGTTTCATA TGACAGAGGA CTGCCGTGGT TCAGATCAGC AGATGATCAT GAAAAAGAAA TCGATGATCC AAAGGGAAGA TTTGACAAGT ATGGAGTTAA TATAAACTGG TATAAGCCGA TGACAATAGG AAAGCAAAGA TTTACATATA GACTGGTAGG AGTAGGACAA TATACACAGG ATGTGCTTTA TGGAAGTGAA AAGATAAGTA TGGGAGATGA ATATACAATA AGAGGATATA AAGGAGATTC CATATCAGGA GATAAAGGAT ATTATGTAAA AAATGAGCTG TCATATAACT TAAATATATC CAAGATAGGA AGTATATCGC CGTATATAGG CTATGATTTT GGAGAGAGCT GGAATAATGA GGTGCATGAT ATATACAGAT ATGGATATAT GAGGGGATTT GCAGTAGGAG TAAAGTATTA CGGGGAAATA TTTAATTTTG ATATAGCATA TACGAAGCCT GATAAGGCAT CAGGATATGT AAGCAAGCCT GAAGATGAGG TATATGTGAC ATTTGGAATA AAATTTTAA
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Protein sequence | MNKSIILAFF LLGSIVFSAG VGDIIERNNA AIENERRQQE LERRQRELER ENFGKEPQII DGTDEVDTSV RFFIRKIEVQ DEYNLLNKAE IKAVTKKYLN RKLSSKDINK LMTDLNNKYI EKGYITTRVR LDETQNLSEG TIRLITLPGT VEGASLNENT FSDRMKVFMS VPKNKKRILR LQDTEQATDQ FNRVSSNNVE IKIAPGQEAG GSILQIENQQ SRTFSANISY NNYGDESTGR DRAKIDITKD NLLGINDSFY ASYQRGRNKR PLRNDYTGSS SIPPGTIIKD KDDLLPADTE AEPEKFNEDW SLNYSFPFRY WTFSTGYSHS YYISSSEGYN GLYDTSGRST QFNLNADRVV YRNKMSKISI NGGLKLKTNQ NYFEDVQLVD RRLTIGSLGI NYSRGFFGGI LGFDVSYDRG LPWFRSADDH EKEIDDPKGR FDKYGVNINW YKPMTIGKQR FTYRLVGVGQ YTQDVLYGSE KISMGDEYTI RGYKGDSISG DKGYYVKNEL SYNLNISKIG SISPYIGYDF GESWNNEVHD IYRYGYMRGF AVGVKYYGEI FNFDIAYTKP DKASGYVSKP EDEVYVTFGI KF
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