Gene Sterm_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_4003 
Symbol 
ID8599447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4236403 
End bp4237098 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content35% 
IMG OID 
Productaspartate racemase 
Protein accessionYP_003310766 
Protein GI269122589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.29712e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG TAGGATTAAT AGGCGGAATG AGTTGGGAAT CAACTTCGGA ATATTATAAA 
AAAATAAATG AAGGAATAAA AGAACAGCTC GGCGGATTTC ATTCCGGTAA AATACTGATG
TACTCTTTTG ATTTTGATGA GATTGAAGCT CTTCAGCATA AAAATCAATG GGATGAGCTT
ACTGAAATGC TTGTAGATGC AGGAACAAGA TTAAAAAAAG CCGGAGCAGA TTTTTTGGCA
ATATGCACAA ATACAATGCA TAAGGTAGCT GATGAAGTAG CAGAAAAAAC CGGACTGAAA
GTTCTTCATA TAGCAGATGT CACTGCAGAA GCTATAATAC AAAAAAATAA AAATATAGTA
GGGCTGCTAG GAACGGATTT TACTATGTCT GAGGATTTTT ACAAAAAACG TCTGAATGAT
AAGTATAATA TAGAAGTAAT GATTCCTGAA AAAATGGAAA GAGAAAGAGT GCACAGGGTT
ATTTATGACG AGCTTTGCTG CGGGATAGTA AAAAGCCAGT CAAAAGCTGA ATTTATAACT
ATAATAAATA ATCTGAAGGA TAAGGGTGCG GAAGGAGTCA TTCTTGGCTG TACAGAAATA
CCAATGCTTA TAGAGCAGAA GGATCTGGAT ATAAGAGTAT TTGATTCTAT GAAGCTGCAT
GCCGATGCAA TAGTAAAAGA GATGTTAAAC GGATAG
 
Protein sequence
MKTVGLIGGM SWESTSEYYK KINEGIKEQL GGFHSGKILM YSFDFDEIEA LQHKNQWDEL 
TEMLVDAGTR LKKAGADFLA ICTNTMHKVA DEVAEKTGLK VLHIADVTAE AIIQKNKNIV
GLLGTDFTMS EDFYKKRLND KYNIEVMIPE KMERERVHRV IYDELCCGIV KSQSKAEFIT
IINNLKDKGA EGVILGCTEI PMLIEQKDLD IRVFDSMKLH ADAIVKEMLN G