Gene Sterm_3935 details

Gene Information

• Locus tag: Sterm_3935
• ID: 8599380
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 4175651
• End bp: 4177693
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 34%
• Product: glycyl-tRNA synthetase, beta subunit
• Protein accession: YP_003310699
• Protein GI: 269122522

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000397713
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATTTTC TTTTTGAAAT AGGTGTAGAA GAATTACCTG CGAGATATGT GGACAGTTCT 
GAAGCAGAGC TTAAGAAACT TATGACTGAA AGTCTTAAGG AGGAAAGAAT AAGCTTTGGT 
TCGGTAAAGT CTTTCAGCAC TCCCAGAAGA CTGGCCTTGC TAATAGAAGG AATGGCTGAA 
AAGCAGGAAG AGCTTCATAA AAAGAGTACA GGGCCTTCAG TGGAAGCTGC TTATAAAGAC 
GGAAAGCTTA CAAAAGCCGG AGAGGGTTTT TTGAAAGGGC AGAATGCTGA CGAGGCAGAT 
ATTAAAATAA TAGAAAATGA AAAAGGAAAA TATATTTCAG TGGAAAAATT TTATGCAGGC 
AAAGATACTG CGGAAATTTT GCCTGACTTA TTAAATAAAG CATTAAAAGG ACTGACATTT 
GATAAGTCAA TGAAATGGTC CGATAAGCAG TTCAGATTCG CAAGACCGAT AAAATGGATT 
TTGGCGCTTC TGGATAACAA GGTGCTTGAC TTTACCTTTG AGGGTATAAA AGCCTCTGGT 
AAAACAAGAG GTATGAGAAA TTTTGCTTCT CAGGATGTAG TAATAAACAA TATTACTGAA 
TATGAAAGTA TTCTTGAAAA AAATTATGTA ATAGCAGATC ATAATAAAAG AAAAGAAAAA 
ATACTGGAAA GTATCAGAGA GAATTGTGAA AATGACGGGG ATCAAGTAAT TATTAATGAT 
TATCTTCTGG AGGAAGTATT GAATCTTGTC GAGTATCCTT ATGCAATAAA AGGAGAATTC 
AATAAAAATT ATCTTGAACT TCCGGAAGAC ATTATTACCA TTACAATGGA GACACATCAG 
AGATATTTCC CGGTAAAGGA TAAAGACGGG AAGCTGGCAA ATAAATTTGT TCTTATAAGA 
AATGCTCCTG TTTATTCAGA AGCTGTAAAA AAAGGTAATG AAAAGGTAAT CGAGCCGAGA 
CTGGCAGATG CCAAGTTTTT CTACGATGAA GATCTCAAAG TAAAATTGGA TCAAAATGTG 
GAAAAATTAA AAAATGTGGT TTTCCAGAAA GATATGGGAA CTATTTATGA AAAAATACAG 
AGATCTGAAA AAATAGCAGA TTATATAATA AGTGAATTAA AACTGGACGA TAAAAAAGAA 
GATATTAAGC GTACAGTGTA CCTTGCCAAA GCGGATCTTG TAAGTAACGT AATAGGAGAG 
AAAGAGTTTA CAAAGCTGCA GGGATTCATG GGAGAAGTAT ACGCCAGACA TGAAGGTGAG 
AAGGAATCGG TAGCAAAAGG AATATTCGAA CATTATCTTC CGAGATATTT TGGGGATATT 
CTGCCGAAAA CCATAGAAGG CGCAGTAGCG GGGATAGCAG ATAAAATAGA TACAATTACA 
GGATGTTTTG CTGTAGGACT GATTCCTACG AGTTCAAAAG ATCCTTATGC ACTTAGAAGA 
GCAGCACAGG GAATAGTTTC AGTATGCCTT TTCCAGAATC TGGATATAGA TTATGACAGA 
CTGATAGACA CTACACTGGA AATATTTAGT GAAAATAAGG AAATTAAAGG TAAAAAAGAG 
GAAGTTGCCG CACAGATAAA AGAATTTTTT AAACAGAGAC TGCTTTATAT TTTATCAGAA 
GAACTGGATA AAGATTTGAT AACTTATGTA ATAAATCTGG AAACAAAAAT AGGAACTCTA 
AAGGACAGGG TAAAAATACT GGAAGAGCTT TCAAAGACAG ACAAATTTGA AATACTTGTA 
AATCTTCTGA AAAGAGTAAG AAATATACTA AGGGAAAATA AAGCGCAGGG AAATCCTGTA 
CAAGAAGATT TGTTTGAAAA AGCAGAGGAA ACAAAGCTTT TTGATTATAT AAAAAGGCTG 
GAAAAAACAG TGAATGAAGA GAGATTTTAC GAAATAGTAA ATATACTTCT CGAAAATGCA 
CATATAATCA ATGATTTTTT TGATAATGTA ATGGTAATTG CAGAAAAAAA CGAGATTAAA 
AATAACAGGC TTGAGTTGCT TCAAAAACTT CAAAAATTAG TAGACAGAAC TATATTTATA 
TAA 

 

Protein sequence

MDFLFEIGVE ELPARYVDSS EAELKKLMTE SLKEERISFG SVKSFSTPRR LALLIEGMAE 
KQEELHKKST GPSVEAAYKD GKLTKAGEGF LKGQNADEAD IKIIENEKGK YISVEKFYAG 
KDTAEILPDL LNKALKGLTF DKSMKWSDKQ FRFARPIKWI LALLDNKVLD FTFEGIKASG 
KTRGMRNFAS QDVVINNITE YESILEKNYV IADHNKRKEK ILESIRENCE NDGDQVIIND 
YLLEEVLNLV EYPYAIKGEF NKNYLELPED IITITMETHQ RYFPVKDKDG KLANKFVLIR 
NAPVYSEAVK KGNEKVIEPR LADAKFFYDE DLKVKLDQNV EKLKNVVFQK DMGTIYEKIQ 
RSEKIADYII SELKLDDKKE DIKRTVYLAK ADLVSNVIGE KEFTKLQGFM GEVYARHEGE 
KESVAKGIFE HYLPRYFGDI LPKTIEGAVA GIADKIDTIT GCFAVGLIPT SSKDPYALRR 
AAQGIVSVCL FQNLDIDYDR LIDTTLEIFS ENKEIKGKKE EVAAQIKEFF KQRLLYILSE 
ELDKDLITYV INLETKIGTL KDRVKILEEL SKTDKFEILV NLLKRVRNIL RENKAQGNPV 
QEDLFEKAEE TKLFDYIKRL EKTVNEERFY EIVNILLENA HIINDFFDNV MVIAEKNEIK 
NNRLELLQKL QKLVDRTIFI