Gene Sterm_3685 details

Gene Information

• Locus tag: Sterm_3685
• ID: 8599131
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 3910911
• End bp: 3913073
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 37%
• Product: Patatin
• Protein accession: YP_003310450
• Protein GI: 269122273

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000342926
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAA AATTCAGGTA TAAAAATATA GCTAAAAGAC TTTTTCTCCT TCTTATTCTT 
TTTTCATGCA GCTTTAGCGA CGGTGACGAT AAAAGAATAG GGCTTGTATT AAGCGGTGGT 
TCGGCAAAAG GACTGGCTCA TATAGGTGTC TTAAAAGTGC TGGAAGAAGA AAAAGTTCCT 
GTTGAATATA TAACCGGAAC AAGTATGGGC AGTATCGTAG GCGGACTTTA CGCTGCTGGA 
TATACCGTGG AGGAAATAGA GAAACTGGCA GTAGAAATAG ATTGGTTTGG TATGTTTACA 
GATAATATCC CGAGAGATTC AAAAGGCGCT GTAAGAAATT ATTTTGAGGA TAAAAATACA 
ATTGCACTGC CGTTTCAGGG ATTTTCCGTG AGCTTTCCCA GCGGAGCTAT CGGCGGTAAA 
AATATCAGCA GTAATCTAAA TGATTTGTTC TACGGAGTAG AAGATGTCAA TGATTTTAGA 
AAATTCCCCC AGAAGTTTGC ATTGGTTGCT ACTGATCTTG AAACCGGAGA AGCCGTTATG 
ATAGATAAGG GATCTCTTCC TACTGCAATA AGAGCGAGTA TGTCACTGCC TACTGTTATT 
TCTCCTGTAA GATATCAGAA TAAGCTTCTT ATTGACGGAG GACTGGTAAG AAATCTTCCT 
GTTCAGGAAG CAAAAATACT CGGGGCTGAC TATACAATAG GAGTTAATGT CGGTGAGGGC 
TTTACTAAGC TCGACGAAAA TAAGATGAAT CTAGTCAATA TTACTGAAAA TGCACTTACC 
ATGGCGGGTA AGCGTGAAGT GGACAGACAG ATCAGAATGC TTGACCTTTA TATAGTACCT 
GATGTTGCAG ATATAGCATC TCCTGATTTT TCCAAAGCCG AGGTCATAAT AGCCCTTGGT 
GAGGCTGCTG CACGTAAGAA TATTGAGGAA ATAAAAAAAT TAAGTGATCC GGTAAAATTT 
GAAGAAATTC AGGAAAAAAG AAAAGAATTC AGAAAAACCT GGAATGATAC TTATTCTATA 
AAAAATATAA AAGTAGTGGG GAATAAAAAA TATAACGAAA AATTCTTTAA TAAATTTATT 
CCGAATAATC TAAATGCCTT AAAAAAAGAA GATATTGACA GTATTATAAA CAAAATTTAT 
TCCAACGGGG ATTTTTTAAC AGTGTATTAT GAAATAGAGG ACGATAACCT CACATTTGTA 
GTTCAGGAAA AGGCAAGCAA CTATCTTACA CTAGGGGGAA ATTTAAATAC AGAGGATTAC 
GCTACTATTT CTATAGGCGT TCAGGGTAAC AGATCCTTTG ACGCAACAGC TCTGAGATAC 
TCTCTAGTCG GAATACTCAG TCAGGAGTAT GCCCTGAACG GTCAGCTCGT CCTGAGTACC 
GGGCTTGATT CCAAAGTGTT TATAATGCCT ACTTTCCACA TAAAAAACGA CATTATAAAA 
AATCAAAATT ATAATGGAAA AAAATTTGAT TTTGAAAATA AAGTATCAAA TATTAATCTT 
GGTTTCGGAG TAGAGCTGGA TAAGAATCTT GTTTTTATAG CAAGTGGCGG TTTTGAAGAA 
TCAAGTGTTA ATCAAAATGA AGATAATTCA AAAAATAAAA AAACGGACTA TCCTGTGTAC 
AGTGCCCAGC TTATATATGA CACAAGAAAT TCATTTATTT ATCCTACGAA AGGATATTAC 
CTGAATACTA TTTATGCCTA CGGCAATTCA TCCGAAGCTG ATTTCAGCTC GCTGAGCTTC 
ATAGGACGGG GTATATTCCC TGTTACAAAG AATTTAAGTA TCATCCCTAC ACTTGAGTAT 
CTTAGTGCTT CCGGAGATGA TATTCCGGAA ACATATCAGC CTAAGCTCGG AGGATATAAG 
ACAAGAGATC ACTCATTGGA ATTCAGAGGG GTCGAAGAAA ACAGCCTTAG AGGGCAGAGT 
ATCACTACTG CTAATCTGAA GCTTCAGTAC AGTATTAATA AATACATCTA TGTAGATGCG 
GGAATTTCAT ATGCTGCAAT ATCGGATACT GCATTCTCAA TAGACGGTGA CACTACAAAA 
CAGAGTTATG ATATCGGAAT AGGAATAAAA ACTCCTTTAG GACCGAGCTA TATCGGCGGT 
TCCAAAACTG AGGGCGAAAA AATAAGATAT TATCTGAATC TCGGTTATGA TATAGGCGAG 
TAA 

 

Protein sequence

MQKKFRYKNI AKRLFLLLIL FSCSFSDGDD KRIGLVLSGG SAKGLAHIGV LKVLEEEKVP 
VEYITGTSMG SIVGGLYAAG YTVEEIEKLA VEIDWFGMFT DNIPRDSKGA VRNYFEDKNT 
IALPFQGFSV SFPSGAIGGK NISSNLNDLF YGVEDVNDFR KFPQKFALVA TDLETGEAVM 
IDKGSLPTAI RASMSLPTVI SPVRYQNKLL IDGGLVRNLP VQEAKILGAD YTIGVNVGEG 
FTKLDENKMN LVNITENALT MAGKREVDRQ IRMLDLYIVP DVADIASPDF SKAEVIIALG 
EAAARKNIEE IKKLSDPVKF EEIQEKRKEF RKTWNDTYSI KNIKVVGNKK YNEKFFNKFI 
PNNLNALKKE DIDSIINKIY SNGDFLTVYY EIEDDNLTFV VQEKASNYLT LGGNLNTEDY 
ATISIGVQGN RSFDATALRY SLVGILSQEY ALNGQLVLST GLDSKVFIMP TFHIKNDIIK 
NQNYNGKKFD FENKVSNINL GFGVELDKNL VFIASGGFEE SSVNQNEDNS KNKKTDYPVY 
SAQLIYDTRN SFIYPTKGYY LNTIYAYGNS SEADFSSLSF IGRGIFPVTK NLSIIPTLEY 
LSASGDDIPE TYQPKLGGYK TRDHSLEFRG VEENSLRGQS ITTANLKLQY SINKYIYVDA 
GISYAAISDT AFSIDGDTTK QSYDIGIGIK TPLGPSYIGG SKTEGEKIRY YLNLGYDIGE