Gene Sterm_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3541 
Symbol 
ID8598987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3753565 
End bp3754506 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content38% 
IMG OID 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_003310306 
Protein GI269122129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTTTATTAGT GTTAGTAACA ATGTTGTTTA TCTTTTCATG CGGGTCAAAG 
GACCAGGCTG CCGGTAAAAC AGAGGATAAA CCAACAGAAA CAGGTGAAAA GACTTATACA
ATAGGAGTGT CACTTCTGAC ACAGCAGCAT CCTTTTTACC TTAGTCTGAA GGATGCCATT
GAAAAAGAAG CAGCGGCACA GAATGTAAAA TTAAATGTTT CAATAGCAAA TCAGGATCTG
AATAAACAGA TTTCGGATAT AGAAGATTTC ATTACAAAAA AAGTAGATGC TATCATTATC
AGTCCGGTGG ATTCTAAAGG AGTTCTTGCT GCGGTAAAGA AAGCAGAAGC GGCTAATATC
CCAGTAATAA CAGTAGATGT TCCTGCTATA GGCGTAGATG TGGCAGCTCA TGTGGCTACA
GACAACTATA CAGGAGGAAA AATAGCCGGT GAAGAAATGG CAAGACTACT TAACGGTAAA
GGTGAAGTGG CAGTCATAGA ATATCCTACA GTAGATTCAG TGGTACAGAG AATAGAAGGA
TTTAAAGAAG TAATAGCTAA ATATCCAGAT ATAAAAATAG TAGCTATACA GGCAGGGATT
ACAAGACCGG AAGCTCTTAC AGCAGCACAG AATATGATTC AGGCAAATAA AAATCTGGGA
GGAATATTTG GTTTTGGTGA TGATGCGGCT CTTGCAGCAG TAGCAGCAGT AAAATCAGCT
GGTAAAGAAG ACCAGATAAA AGTAATAGGA TTCGATGGGA TGCAGGAAGC AAGAGATGCA
GTAACAAAAG AAAAATCATT TGCGGCAGTA ATAACACAAT ATCCTGAGGA TATGGGAAAA
ATAGCAGTAG ATACTACTCT GAAAATTTTA AAAGGCGAGC AGGTGGAGAA AAATATACCT
GTAACACCAG GAATTTTTAC AAAAGAGGGA GAAAAAAAAT AA
 
Protein sequence
MKKILLVLVT MLFIFSCGSK DQAAGKTEDK PTETGEKTYT IGVSLLTQQH PFYLSLKDAI 
EKEAAAQNVK LNVSIANQDL NKQISDIEDF ITKKVDAIII SPVDSKGVLA AVKKAEAANI
PVITVDVPAI GVDVAAHVAT DNYTGGKIAG EEMARLLNGK GEVAVIEYPT VDSVVQRIEG
FKEVIAKYPD IKIVAIQAGI TRPEALTAAQ NMIQANKNLG GIFGFGDDAA LAAVAAVKSA
GKEDQIKVIG FDGMQEARDA VTKEKSFAAV ITQYPEDMGK IAVDTTLKIL KGEQVEKNIP
VTPGIFTKEG EKK