Gene Sterm_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3540 
Symbol 
ID8598986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3752028 
End bp3753542 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content36% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003310305 
Protein GI269122128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.285144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACA TTTTGGAAAT GAAGGGTATT ACAAAAAGAT TTAGCGGTGT CACGGCATTA 
TCAAATGTAG ATTTAAAGCT TGCAAAGGGT GAGGTACATA CTTTGCTTGG GGAAAATGGA
GCCGGGAAGT CTACACTTAT GAAGATTTTA TCAGGGGTTT ATACCCCTGA TGAAGGTGAA
ATAATTTTAA AAGGGAAAAA AACTGATATA AAAAATCCTA AAGAATCACA GAGTCTCGGA
ATAAGCATAA TATATCAGGA ACTAAGTCTG TGTCCCAATA TGAGCATATC AGAAAATATT
TTTGCAAACA GGGAGCCGAT GAATAATCTT TTTGTTAATT ATAAGGAAAT GACAAAAAAA
AGTAAGGAAA TACTGGAATA TCTTGATGTA GATATGGAGC CGTCGGTTTT GGTACAGGAT
CTTAGTATTT CCGAGAGACA AATGATCGAA ATAGCCAAAG CAGTGGCATT TAAAGCTGAT
ATAATAATTA TGGACGAACC CACTTCTTCT CTCAGTCTGA AAGAATCAGA AAAACTTTTC
GAAATTATAG ATAAGCTGAA AAAAGACGGG GTATCAATAA TTTATATATC GCACAGAATG
GATGAGCTCT TGAGAATATC TGATAATATA ACAGTAATGA GAGACGGGGA ATATATCGGA
ACTGTTCCGA GAGAAAAGGC AGATATTGAC GGGCTTATAA AAATGATGGT AGGACGGGAA
ATGAAAGATA TTTATCCTAA AAAAGACTAT CAAACAGGAA ATGAAGCTGT CCTGAGAGTG
GAGTCACTAT CAAAGAAGGA TTATTTTGAA GACATAAGCT TTGATATAAA AAAAGGAGAA
ATAGTCGGTT TCTTCGGTCT CGTAGGAGCC GGAAGAAGTG ATGTGGCAAA GGCAATATTT
GGTGTTGCTT CTTTGGATAA CGGACAGATT TTTATAAATA ATAAAAAAGT AAATATAAAA
TCACCGGAAG ACGCCATAAA AAATAAAATA GCATTTATTA CAGAAAACAG AAGAGAAGAA
GGAGTAGTGC TGGATAATGA TGTAAAGGTG AATATTACCA TGGCTACAAT AGATAACATA
ATAGGCAGGC TAAAGCTGAT TGATAATAAA AAGGAAGAAG GAATTGCCAA GACTGAAATA
AAAAATCTGA GAATAAAAAC GTCGGGCAGT GACCAGCACA TAAGAAACCT GAGCGGAGGA
AACCAGCAGA AGGTAATACT GGCAAAATGG CTGGAGACTA AACCGGATAT ATTGATTCTG
GATGAGCCTA CAAGGGGAAT AGATGTAGGA GCCAAACACG AAATATATGA AATAATGAGA
AGACTGGCAA GTGAAGGTGT GGGAATAATA ATGATATCTT CAGAGTTATC CGAGGTATTG
TTTATGAGTG ACAGGCTTTT TGTAATGAGA GAGAAAAAAA TAGTAAAAGA GCTGAATCCG
GAGCTGACAA CTCAGGAGGA AATAATGAGA TATTCAACAG GAGGTGTAAA CTTAGATGGA
AATGATAAAT TTTAA
 
Protein sequence
MEYILEMKGI TKRFSGVTAL SNVDLKLAKG EVHTLLGENG AGKSTLMKIL SGVYTPDEGE 
IILKGKKTDI KNPKESQSLG ISIIYQELSL CPNMSISENI FANREPMNNL FVNYKEMTKK
SKEILEYLDV DMEPSVLVQD LSISERQMIE IAKAVAFKAD IIIMDEPTSS LSLKESEKLF
EIIDKLKKDG VSIIYISHRM DELLRISDNI TVMRDGEYIG TVPREKADID GLIKMMVGRE
MKDIYPKKDY QTGNEAVLRV ESLSKKDYFE DISFDIKKGE IVGFFGLVGA GRSDVAKAIF
GVASLDNGQI FINNKKVNIK SPEDAIKNKI AFITENRREE GVVLDNDVKV NITMATIDNI
IGRLKLIDNK KEEGIAKTEI KNLRIKTSGS DQHIRNLSGG NQQKVILAKW LETKPDILIL
DEPTRGIDVG AKHEIYEIMR RLASEGVGII MISSELSEVL FMSDRLFVMR EKKIVKELNP
ELTTQEEIMR YSTGGVNLDG NDKF