Gene Sterm_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3472 
Symbol 
ID8598923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp3677443 
End bp3678159 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content35% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003310242 
Protein GI269122065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00483129 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAT TAAATAACGA AACTAGCGAG CTTTTATACA AACAGCTTGC CAATATAATC 
AGAAATGACA TTTTTGAAGG TCGGTTTAAA CAGGATGAAA GAATACCTTC TGAATTTGAC 
TTAAGCCATA TTTATAAAAT TAGCAGAAGC ACTGTCCGTA AAGCGATTTC ACTTTTGTCA 
GAAGAGGGGC TTCTAGTAAA AATACATGGT AAGGGGACTT TTGTGGCAAG TCCTAAATTT 
AAAAATTCTT CATCTACTTT TTTAAGTTTT ACGGAAAATG TAGATGCTAT GGGAAAATCT 
TTAATCACTA ATACAATTAG CAGGTATTAT GAAACTGCAA CACCGGATCA GAAACGTTTT 
TTTCAATTAG ACGGAGCAGA AGAACTTCTA AAGATTATTC GTCTTCGAAG TATTGAAGCA 
CTTCCGATTT GTGTTGAAAC AACCTGGTTC ACAAAAGATT ATGATTCTTT GCTGACAAAA 
AATTTAAACG GTTCATTGTA CTCAGTGTTA AGGAAAGATT ATGAAATAGA ACCATCTGCC 
GGCAGTAAAA CTATTGAGTT ATGCTATGCT TCTGCACAGG AAGCAGAGCT TCTTGATGTA 
CCCAGAGGGT CAGCTTTAAT GCTGGTGGAA GATTATGTTT ATGACAGTTA TAATAAGCCG 
CTTCATATTA CAAAGCAGGT AGTGAGAGGA GATAAATTCA AATATGCTTT AAAGTGA
 
Protein sequence
MDTLNNETSE LLYKQLANII RNDIFEGRFK QDERIPSEFD LSHIYKISRS TVRKAISLLS 
EEGLLVKIHG KGTFVASPKF KNSSSTFLSF TENVDAMGKS LITNTISRYY ETATPDQKRF 
FQLDGAEELL KIIRLRSIEA LPICVETTWF TKDYDSLLTK NLNGSLYSVL RKDYEIEPSA 
GSKTIELCYA SAQEAELLDV PRGSALMLVE DYVYDSYNKP LHITKQVVRG DKFKYALK