Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3345 |
Symbol | |
ID | 8598797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3519845 |
End bp | 3521170 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | glycoside hydrolase family 4 |
Protein accession | YP_003310116 |
Protein GI | 269121939 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAAAA TTAAAATTGT AACTATTGGC GGAGGTTCCA GCTACACACC GGAACTGATT GAGGGATTTA TTAAGAGAAG TGCGGAGCTT CCAATAAGGG AAATTTGGCT TGTTGACATA GAAGAGGGGA AAGAGAAGCT TGAAATAGTG GGGAATCTGG CAAAACGTAT GGTAGAAAAA GCTGGACTGG ACTGGCAGAT ACATCTGACT CTGGACAGAG AAGAAGCTTT GAAAGGTGCT GATTTCGTAA CAACACAATT CAGGGTTGGT TTCCTTGATG CTCGTATAAA AGATGAAAGA ATACCTTTTG AAAATGGTCT GCTTGGTCAG GAAACAAACG GTCCCGGCGG AATGCTGAAA GCATTTCGTA CAATTCCGGT AATTCTTTCT ATAGTTGAAG ACATGAAAAG ACTTTGTCCT GATGCATGGC TCGTAAACTT TACAAATCCG GCAGGAATGG TAACAGAAGC AGTATTGAAG TATGGGAAAT ATGAAAAAGT GGTGGGACTG TGCAATGTTC CTGTAAACCA TATGATGAGC GAATCAAAGC TTCTTGGCAA GGATGCCAGT GAATTGTTTT TCCACTTTGC AGGATTAAAC CACTTTGTAT GGCACAAGGT ATATGATAAT AAAGGTAATG ATATAACAGG AGAAGTAGCT GCGAAAGTAA TAAGCGAAGA AGAAGCAGGA GTGGCTAATA TAGAAGTAAT GCATTTTCTT CAGGATCAGC TTGATCACTT AGGAATGATA CCGTGTTATT ATCACAGATA CTATTATCTT CAGGACGATA TGCTTCAAAA AGGACTTGAA AGCTATAAAA ATGAAGGAAC TCGTGGTGAA GTGGTAAAAA GAGTGGAAGA AGAATTATTT GAACTATATA AAAATCCAGA CTTAAAAGAT AAGCCTACAC AGCTTGAAAA AAGAGGAGGA GCATATTATT CAGATGCTGC ATGTGAATTG ATAAATTCAA TACATAATGA CAAAAAAATA TTAATGGTAG TAAATACGCG TAATAACGGA ACAATAGATG ATCTTCCTTA TGACTGTGCT ATAGAAACTA CTGCATATAT AACTGCATCC GGTCCAAGAC CTCTTAATTT CGGGAAATTT CCTACTGCAC AAAGAGGATA TATCCAGATA ATGAAAGCAA TGGAAGAACT TACAATAGAA GCGGCTGTAA CTGGAGATTA TAAAATAGCA TTAGAAGCAT TCATTACTAA TCCTTTAGTA CCTGGAAGCA CTATCGGTAA AAAGGTATTA GATGAATTAT TAATAGCTCA CAAAAAATAT CTTCCTCAGT TTAAAGATTT TTTTGACAAA CAATAG
|
Protein sequence | MSKIKIVTIG GGSSYTPELI EGFIKRSAEL PIREIWLVDI EEGKEKLEIV GNLAKRMVEK AGLDWQIHLT LDREEALKGA DFVTTQFRVG FLDARIKDER IPFENGLLGQ ETNGPGGMLK AFRTIPVILS IVEDMKRLCP DAWLVNFTNP AGMVTEAVLK YGKYEKVVGL CNVPVNHMMS ESKLLGKDAS ELFFHFAGLN HFVWHKVYDN KGNDITGEVA AKVISEEEAG VANIEVMHFL QDQLDHLGMI PCYYHRYYYL QDDMLQKGLE SYKNEGTRGE VVKRVEEELF ELYKNPDLKD KPTQLEKRGG AYYSDAACEL INSIHNDKKI LMVVNTRNNG TIDDLPYDCA IETTAYITAS GPRPLNFGKF PTAQRGYIQI MKAMEELTIE AAVTGDYKIA LEAFITNPLV PGSTIGKKVL DELLIAHKKY LPQFKDFFDK Q
|
| |