Gene Sterm_3222 details

Gene Information

• Locus tag: Sterm_3222
• ID: 8598675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3374414
• End bp: 3375160
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 37%
• Product: Carboxymuconolactone decarboxylase
• Protein accession: YP_003309994
• Protein GI: 269121817

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.02067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAGAG AATTGCTTTA CAGGGAAAAA ATGAAACAGC TGTTTGGAGA TGCAGATTCA 
TCTTTGTTTA CTGCAGATCC GGAATTTGCG GAAATATTAA ATAAGTTTGT TTTCGGCGAG 
GTATATAATC ATGGAAAGCT TACTGATAAA GAGCGGATAT TAATAACTTT ATGTGCTCTG 
ACAGCAGGAG GTATTTTTAA AAATTTTAAA CGTTATATAA AAGCGGGACT AAATACAGGA 
TTAAGTCCTG AGGATATTAA GGAGGCTTTA TATCAGTGTG CACCTTATAC AGGGTTTCCA 
AAAGCATTAA AGGCAATACA CAAAGCTGAT AAAGTATTTA GGAAAGCAGG AATATCTCTT 
CCTGTAAAAA GTATGAAAAA GACTGATGAA AATAATCGTT TTAATGAAGG ACTGAAGGTT 
CAGGAAACAA TATTCGGTGA AAGAATCCGC CGGATGCATG AAAATGCTCC TGAAAATCAG 
AAGCATATAC AGAATTATCT TAGTGCTATG TGTTTTGGGG ATTTTTACAC AAGGGACGGG 
CTGGATATAA AAATGCGGGA ATTATTGACA CTATGTATTC TGAGTGCACT CGGAGGATGT 
GAGAATCAGC TGAGATCACA CATAGAGGGA AATCTCAGTG CAGGGAATGA CAAAGATATA 
ATGATAGAAG CAGTAACACA GTGTATGCCG TATATAGGCT TTCCAAGAAC ACTGAATGCA 
CTGGGCTGTA TAAATGAAAC GGCATAA 

 

Protein sequence

MDRELLYREK MKQLFGDADS SLFTADPEFA EILNKFVFGE VYNHGKLTDK ERILITLCAL 
TAGGIFKNFK RYIKAGLNTG LSPEDIKEAL YQCAPYTGFP KALKAIHKAD KVFRKAGISL 
PVKSMKKTDE NNRFNEGLKV QETIFGERIR RMHENAPENQ KHIQNYLSAM CFGDFYTRDG 
LDIKMRELLT LCILSALGGC ENQLRSHIEG NLSAGNDKDI MIEAVTQCMP YIGFPRTLNA 
LGCINETA