Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3105 |
Symbol | |
ID | 8598559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3251987 |
End bp | 3252997 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_003309878 |
Protein GI | 269121701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000266277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTAA TATTAATTAT AGTTTTGATA TTGGGATTAT TATTGTTTTT CAACAAAAAA GGAGTTCCGT GTATAATGTA TCATAATGTA AGTTATGAAA AAGGGATTAC ACCGGAAGAA TTTGAAGAAC AAATGATGCT GCTGCAAAAG TATAAGACCT TTAAACTGGA AGAATTAGAC AGGATGGGAA ATAAATTTCC TGAAAATACT GTTTTAGTTA CTTTTGATGA CGGGTATGCA GATAATTATA CAAATGCTTT TCCATTATTA AAAAAATATA ATATAAAAGC AACTATTTTT TTGAATACAG CATATATAAA TAACGATCCT TTTTATATGA ATTGGGATCA GATACGAGAG ATGTATAAGA GTGGTTTAGT TGATTTTCAA CTGCATACAC ACTCACATTT TACTGTAGTG AAAAGAGTGG AAGTTCAAGG ATTTTTTGAA GTCGGTGACA AAAATAAACG TGAGTTAAAC AGAGAAATGA AAAATATCTA TAGAACAAAC GAAGTTAGAG AAGGATATCC TGTATTTAAA AAAAGAGGTG AAACCGCTAT AAGAGGATAT AAAGTAACTG ATGAGTTTAT GAATAAATAT GATGAGTTAC TGGGAAAATA CAGAGATATG GACAGAGAGA AGAAAGAAAA AATATTAAAA GAAGAAATAG AAAGGAATCT AAAACATTTT ATAGTTGAGT ATACAGAAGA AGAATATAAT TTAAGAGTAG AAAATGAGAT AATAAAAAAC CAAAATTTTA TAAAAAAAAA TCTTGGGAAA GATAGTGATT ATTTTGCAAA TCCATGGGGA CATAAATCAA AAGAGTTACT TTTGATATTA AAAAAATTAG GAATTAAGGG AATGATAACT ACCAAAAAAG GAACTAATTA TTTGAAGCCG AATATTTATA AAATAAGAAG ATATGAAACA AAATCAATGA AGCAGTTTAA AAAGTTATTA TTTATAAATA ATAATTATAT TCTTGGTAAA ATTTATGAAT TGATTTCATG A
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Protein sequence | MLLILIIVLI LGLLLFFNKK GVPCIMYHNV SYEKGITPEE FEEQMMLLQK YKTFKLEELD RMGNKFPENT VLVTFDDGYA DNYTNAFPLL KKYNIKATIF LNTAYINNDP FYMNWDQIRE MYKSGLVDFQ LHTHSHFTVV KRVEVQGFFE VGDKNKRELN REMKNIYRTN EVREGYPVFK KRGETAIRGY KVTDEFMNKY DELLGKYRDM DREKKEKILK EEIERNLKHF IVEYTEEEYN LRVENEIIKN QNFIKKNLGK DSDYFANPWG HKSKELLLIL KKLGIKGMIT TKKGTNYLKP NIYKIRRYET KSMKQFKKLL FINNNYILGK IYELIS
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