Gene Sterm_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3105 
Symbol 
ID8598559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3251987 
End bp3252997 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content26% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_003309878 
Protein GI269121701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000266277 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAA TATTAATTAT AGTTTTGATA TTGGGATTAT TATTGTTTTT CAACAAAAAA 
GGAGTTCCGT GTATAATGTA TCATAATGTA AGTTATGAAA AAGGGATTAC ACCGGAAGAA
TTTGAAGAAC AAATGATGCT GCTGCAAAAG TATAAGACCT TTAAACTGGA AGAATTAGAC
AGGATGGGAA ATAAATTTCC TGAAAATACT GTTTTAGTTA CTTTTGATGA CGGGTATGCA
GATAATTATA CAAATGCTTT TCCATTATTA AAAAAATATA ATATAAAAGC AACTATTTTT
TTGAATACAG CATATATAAA TAACGATCCT TTTTATATGA ATTGGGATCA GATACGAGAG
ATGTATAAGA GTGGTTTAGT TGATTTTCAA CTGCATACAC ACTCACATTT TACTGTAGTG
AAAAGAGTGG AAGTTCAAGG ATTTTTTGAA GTCGGTGACA AAAATAAACG TGAGTTAAAC
AGAGAAATGA AAAATATCTA TAGAACAAAC GAAGTTAGAG AAGGATATCC TGTATTTAAA
AAAAGAGGTG AAACCGCTAT AAGAGGATAT AAAGTAACTG ATGAGTTTAT GAATAAATAT
GATGAGTTAC TGGGAAAATA CAGAGATATG GACAGAGAGA AGAAAGAAAA AATATTAAAA
GAAGAAATAG AAAGGAATCT AAAACATTTT ATAGTTGAGT ATACAGAAGA AGAATATAAT
TTAAGAGTAG AAAATGAGAT AATAAAAAAC CAAAATTTTA TAAAAAAAAA TCTTGGGAAA
GATAGTGATT ATTTTGCAAA TCCATGGGGA CATAAATCAA AAGAGTTACT TTTGATATTA
AAAAAATTAG GAATTAAGGG AATGATAACT ACCAAAAAAG GAACTAATTA TTTGAAGCCG
AATATTTATA AAATAAGAAG ATATGAAACA AAATCAATGA AGCAGTTTAA AAAGTTATTA
TTTATAAATA ATAATTATAT TCTTGGTAAA ATTTATGAAT TGATTTCATG A
 
Protein sequence
MLLILIIVLI LGLLLFFNKK GVPCIMYHNV SYEKGITPEE FEEQMMLLQK YKTFKLEELD 
RMGNKFPENT VLVTFDDGYA DNYTNAFPLL KKYNIKATIF LNTAYINNDP FYMNWDQIRE
MYKSGLVDFQ LHTHSHFTVV KRVEVQGFFE VGDKNKRELN REMKNIYRTN EVREGYPVFK
KRGETAIRGY KVTDEFMNKY DELLGKYRDM DREKKEKILK EEIERNLKHF IVEYTEEEYN
LRVENEIIKN QNFIKKNLGK DSDYFANPWG HKSKELLLIL KKLGIKGMIT TKKGTNYLKP
NIYKIRRYET KSMKQFKKLL FINNNYILGK IYELIS