Gene Sterm_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2348 
Symbol 
ID8597812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2494756 
End bp2496492 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content35% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003309132 
Protein GI269120955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0317134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAT TAAAGAAATT ATATTTACAG TTAAACAAAT ATATAAAAAG ATACGGAGTT 
CTCATAGGGG TTAATTTTCT TATGACAATT CTGGCAGGAG TAACTGCGGC AGCTCCTCTT
GCACTGGTAA ACAGACTGTT TGACAAGGGG ATTTCCGGAG GCAGTGAAAA GGATATATTA
TATGCGGCGT GTTCAATGAT AGGGCTGGCA GTAATGGGCG GTTTTTTAAT ATATTTATCT
ACTATTTTTT CCGGGCGTAT ATCTACCGGA ATATACAGAG ATGTTATAAA TGATATGTAT
GTAAAGATAC AGAGTCTGGA TCTGAAATTT TTTACTGAAA TAAAAGTAGG GGAATTAATG
GTAAGATTTA CCAATGATGC ACAAAATATA AATACTATGA TACTGAATCT TTTTAATCTG
CTTTCATATG TAGTGCAGGC GGTAGTCTTA TTTAGTATAG CAATGTACAC AGACTGGAAA
CTGACTTTGT CCATTGTTGT AATAACTCCG ATTTTGATCC AAATAGTAAA AAAATATGCT
AAAAAATTAA AAAAAGCCGG AAAAGACAGA CAGGAAGCAA CAGGAGACCT AAACAGCACA
CTTCAGGAAA CTATATCAGG TATTAAAGTA ATTAAGGCTT TTGCTACTGA GAGTTATGAG
AAATCAAAGT TTAAAAATCT TACAAACAAA CTGAGAGTGC ATAGTATGAA CAGTATAAGA
TATGATGCAA AATCGAATTC CATTACTGAA GGACTGAACT ATATTATAGT AGCTTTACTT
CTGATGTTTG GCGGATACAG GGTAATAAGA GGACATGGCT TCACAACCGG ACATTTTATT
ACTGTAATAG GGGCTATTTC TGCCATGTAT ACTCCTGCCA AAAGATCGGT GGGAACAATT
AATAACATTA ATAATAATTC GTCTGCTATA GAGAGAGTAT TTGAGATAAT GAAGCTGGAG
CCGGAAATAA TAAACGGCGA AAATCCGGTG AAATTTGATA CATTTAAGCG GGATATAGAA
TTATCTAATG TCTTTTTTTC CTATAATGAT GATGAAGATT ATGTATTAAA AGATATAAAT
CTTTATGTGA AAAAAGGAGA AACTGTGGCT CTGGTGGGGA ATTCCGGAGG CGGGAAAACT
ACAATAGCCA ATCTGATACC AAGATTCTAT GATGTAAGTA AGGGTAGTAT AAAAGTAGAC
GGTATAGATG TAAGAGATTA TGAGATAAAA TCACTCAGAA GAAATATAGG AATAGTCCCG
CAAGAAACTT TTCTGTTCGG CGGATCAATA AAAGAAAATA TAAGATATGG AAACAGACAC
GCTACAGATG ATGAAATAAT CAGAGCAGCT AAGATGGCAA ATGCCCATGA ATTCATCGTG
AAACTTAGTG ACAGTTATGA AACAGAGATT GGTGAAAGAG GGGTACTTTT ATCGGGCGGG
CAGAAGCAGA GAATTGCTAT AGCAAGAGCG ATTTTGGAAA ATCCGCAGAT ACTGATTCTG
GACGAAGCAA CAAGCGCACT GGATAATGAA TCAGAAAAGC TGGTTCAGGA GGCTTTGGAG
AAGTTAATGC TGGAAAAAAC TACTTTTATA ATAGCTCACA GATTATCTAC AGTAATAAAC
AGTGATAAAA TAGTAGTGCT GCAAAAGGGT GAAATCAAAG AAATGGGAAC TCATCATGAA
TTAATTGCCA AAAACGGGAT ATATAAATCA TTATATGAGA GAAATTTCGA AGACTAA
 
Protein sequence
MNELKKLYLQ LNKYIKRYGV LIGVNFLMTI LAGVTAAAPL ALVNRLFDKG ISGGSEKDIL 
YAACSMIGLA VMGGFLIYLS TIFSGRISTG IYRDVINDMY VKIQSLDLKF FTEIKVGELM
VRFTNDAQNI NTMILNLFNL LSYVVQAVVL FSIAMYTDWK LTLSIVVITP ILIQIVKKYA
KKLKKAGKDR QEATGDLNST LQETISGIKV IKAFATESYE KSKFKNLTNK LRVHSMNSIR
YDAKSNSITE GLNYIIVALL LMFGGYRVIR GHGFTTGHFI TVIGAISAMY TPAKRSVGTI
NNINNNSSAI ERVFEIMKLE PEIINGENPV KFDTFKRDIE LSNVFFSYND DEDYVLKDIN
LYVKKGETVA LVGNSGGGKT TIANLIPRFY DVSKGSIKVD GIDVRDYEIK SLRRNIGIVP
QETFLFGGSI KENIRYGNRH ATDDEIIRAA KMANAHEFIV KLSDSYETEI GERGVLLSGG
QKQRIAIARA ILENPQILIL DEATSALDNE SEKLVQEALE KLMLEKTTFI IAHRLSTVIN
SDKIVVLQKG EIKEMGTHHE LIAKNGIYKS LYERNFED