Gene Sterm_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2309 
Symbol 
ID8597774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp2442278 
End bp2442871 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content26% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003309094 
Protein GI269120917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.160392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT TACATACAAA AGAAAAGATT TTAACTGGAA TGTTAAGATT AATATGGGAA 
GTAGGCTTGG AAAAATCCTC AATAGCATTA TTATCACAGA AAATAAAGAT AAGTCCGGGA 
AATATCTATT ATTATTTTAG AGGCAAGGAA GAAATTATTA ATTCACTTTG CTTTTACTGT 
TCAGATCTGC TTAGCAGTGC AATAAAGCCT AAAGAATACG AGGCATTTTA TGATAACTGC 
AGCATAGAGA TTTTGGAAAG AGAATTTAAA TCTTTTATAA CAAAAATGAT AATTTTTTAT 
AAAAATAATC CTCATATAAT TAATTATATT ACAGTAATCA ACGGTTCTTC ATACATAAAA 
CAGGAAATGA AGAAAAAAAT AAGACTTGAA AAAGATATAT ACTGGAAATT TTTGGAAAAA 
TTAAAAGAAA ACAAAGCAAT AAAAGATGTT TCTACGAGTA TCCTGATATC ATTTATTACA 
TCAGTTATGC ATGATATGGT AGTTCAGGAT GTAGTATTAA ATAATTTAAC TTTAGATGAC 
AAAAAAATAG ATGCATTATT TAATTTAATA TGGTCCGGTT TGTCGTCAGA ATGA
 
Protein sequence
MEFLHTKEKI LTGMLRLIWE VGLEKSSIAL LSQKIKISPG NIYYYFRGKE EIINSLCFYC 
SDLLSSAIKP KEYEAFYDNC SIEILEREFK SFITKMIIFY KNNPHIINYI TVINGSSYIK 
QEMKKKIRLE KDIYWKFLEK LKENKAIKDV STSILISFIT SVMHDMVVQD VVLNNLTLDD 
KKIDALFNLI WSGLSSE