Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2090 |
Symbol | |
ID | 8597555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 2215841 |
End bp | 2220106 |
Gene Length | 4266 bp |
Protein Length | 1421 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_003308875 |
Protein GI | 269120698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.591044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTA AATATATGAA ATTAAAACCA TCGGATGATA TATACGAGAG ACTTAACATA AAAAGTTTTT CCATAGAACA CATTAATTTA TTCTCCAAAA AAAAGGAAAT GGAAGTTTTG ATCAAAATTA TCCATATAGA TGCTTTCAAA GAAGTGATGG ATCTGCGGCG TGAGCTGACC AAAACCTTCA GCGACAGCAT AAGGGTAAAA ATGAAATTTC TTATGAATAC TGTTGTAGAA AGTGATAAAC TGACAAGTCT CGTGGAATTT CTTCTGGATA ATTACAAAAA TGAAAGTATC AGACATCAGT ACATTTTCTC AGATTATGAA ATTTATTACA GAAATAATAA AAATATACAA ATAGAGCTGA AAAGTCACCA TCTGATAGAA CAGGCAGTCA GTCAGGGAAT AGATAAGGAT CTTCAGATAA AACTAAAAGA AGTTACTGAC CGGGAGTTTA AAATAAGCTT TATAAGCGAG AAAGAAGAAG GGGAATTTAT AGCAGAAGCC ATAGAGGAAT ATGCGGTGAT AATGGAAGAA ACTTTTATGG TGGAGGATAC CACATCACAA AGCTCCACTC CGGTATTATA CGGTGAGGTA ATAAAGAGCA GAATCATGGA CTATTCAGTA TTTGATCAGC TTCAGGTCGG GGAAAACATG ACTATTGAAG GGGAAGTATT CAATATAAAT ACAAGAGAGC TGAAAAATGA CAAGCTGCTT ATTTCCTTTA ATGTTACAAA TTACAAGGAT TCTATTTCAT GCAGGCTTTT TCTTTTGAAA ACGGAAGATT TGAAGCTGAA AAACGGTGAA TGGGTAAAGC TTAAGGGAAG AGTTACACAG GACAGATTTA ATATCGAAGA TTATTATCTC ATTATTTCAT CAATAGAGAG AATTCCGTCA AGACTGGAAA GAAGAAAAGA CGAAGCGGAA GTAAAAAGAG TGGAATTACA TGCACATACC AATATGAGCG AAATGAGCGG CGTAGTATCT GCTAAAGATC TCATAAACAG AGCTGTAGAA TACGGACATA ATGCTATAGC CGTTACAGAT TACGGAGTGG CATATTCGTT TCCTTTTGCA TACAAAGCGG CGCCAAAAGA CTTTAAGGTT ATTTTCGGCG TAGAAGCCTA TGTGGTGGAT GACGAACAGA ACATGGTGGA AAGACCGAAA GATGCCATGA TAGAACAAGA GGAATATATT ATATTCGATA TAGAGACTAC CGGTTTCGAT CCGTATAAAG ATAAAATAAT AGAAATAGGT GCGGTAAAAC TAAAAGGCCG TAATATAATA GACAGATTTT CCGCTTTTGT AAATCCGGAA GTACCTATAC CGGAAGAAAT AATAAAGCTT ACAAATATCA CAGATGATAT GGTAAAGGAT GCAGAGCTTA TTGATACAGT CCTTCCGCGT TTTTTGGAAT TCTGCGGAGA TTGTACAATG GTAGCCCATA ATGCGAAATT CGATGTGGGA TTCCTTACGC AAAAGGCAAG ACAGCTTGAA CTGGAATTTC TGCCCAGTGT CATTGATACC TTATACTGGG CAAGAGTCCT TATCACAGAC CTGAAAAGAT TTAACCTGAA AGCACTCGCC AATTATTTTA ACATATCTCT TGATAATCAT CACAGGGCAG TAGATGATGC TGAAGCTACG GCTTCTATCT TTATAAAAAT GCTGAATATG GTTTTATCAA AAGGTATACT CCAAATTTAT GAAATAAATG ACACATTTCA GAATAACGTT CAGACAGCCG ATACTATGAA CACAATGATA CTGGTAAAGA ACAGGGAAGG GCTCAAGGAT TTGTACGAGC TTATTTCAAG ATCGCATCTG GATTTTTTTG GTGAGAGAAA GCCCAGAATT CCCAAGAGTA TGCTTAAAGA AAAAAGAGAA CATCTGTTAA TAGCAAGTTC TGCGAATTCA GTATTTAGAA ATGACGGAGA ATTGGTAAGA GCATATTTGA GAGGTATGTC AAAAGATGAA ATAGAAGAAA GAGCAGATTT TTATGATTAT ATAGAAATAC ATCCTGCTGC CAACTATATT GAAATGGTAA ATAACGGAGA GATGGAAAGC CTGGATATAG CCATGGAAAT GAATAAATAT TTTTATGAGC TGGGTAAAAA AACAGGGAAA ATCGTAGTGG CAACAGGAGA TGCACATTAT CTGGAAGAGT GGGAATCTGT TAACAGAAGC GTATTGATAC TGGGATCGGG TATGGGACAC AGGTCATTTA AGCATGACAG AAAGCTTTAT TTCAGAACAA CTGACGAAAT GCTTGATGCT TTTGCATTCT TAGGTGAGAA GGAAGCATAT GAGGTGGTAA TAGAGAATAC CAACAAACTG GCTGATATGA TAGAGCGGCT AAAACCGATT CCTGACGGAT TTTATCCTCC GAAAATAGAG GGTGCGGAGG AAGAAGTACG GGAAATGACC TATAACAGAG CCAAAAAATT ATACGGGGAA AATCTTCCCG AAATTTTGGA AAAAAGAATA GAACATGAAT TGGAAGCAAT TATAGGCAAC GGCTTTGCGG TACTTTATCT GATAGCGCAA AAGCTGGTTA AAAAATCACT TGATAACGGA TATCTCGTAG GTTCAAGAGG ATCGGTAGGT TCGTCAATAG TTGCTTATAT GATGGAGATA ACAGAGGTAA ATGCTATGTA TCCGCATTAC AGATGTCCTA ATCCTGAATG TAAACACAGT GAATTTACTG ATATGGCAGG CAGCGGAGTC GATCTTCCCG ATAAAAACTG TCCTAAATGC GGAACAAAGT ATATAAAAGA CGGGCATTCA ATTCCGTTTG AGGTATTTAT GGGATTCAAA GGTGACAAGG TACCGGATAT TGACCTTAAC TTTTCAGGGG AATATCAGTC AGAGATTCAC AGATACACAG AAGAGCTTTT TGGAAAAGAT CATGTATTTC GTGCAGGGAC AATATCGACA CTGGCTGAAC GAAATGCATT TGGTTATGTA AAAAAGTACT TTGAGGAAAG CGGTATTCAT AAAAGAAAAG CTGAAATAGA AAGAATAGCA AAGGGGTGTG AAGGAGCAAG AAAGACAACA GGACAGCATC CGGGAGGAAT GATAGTACTT CCGAGTGACA AGTCGATATA TGAATTTACC CCTATACAAA AACCGGCTAA TGATAAAACA GCAGAATCCA TAACTACACA CTTTGATTAC CACGTAATGG ACGAACAGCT GGTAAAGCTG GATATACTCG GACATGATGA TCCTACTACT CTTAGAATAC TTCAGGATCT TACAGGGATT GATATATACC AGATACCTCT TGACGACCCT AAGGTACTCA GTATATTTAA CTCTACAGAA GCATTGGGTG TTACACAGAA GGACATAGGT TCCGTAATAG GATCATTTGG TATACCAGAG TTCGGTACTA AGTTCGTACG GGAAATGCTT ATAGAAACAA AGCCGAGCAG TTTTGCAGAA TTGGTGAGAA TCTCGGGACT TTCACACGGA ACAGATGTAT GGCTGAATAA CGCCCAGGAT TATGTAAAAG CAGGAATAAC AACTCTTAGT GAAGTTATCA CCGTGCGGGA TGATATTATG AACTATCTTA TAGATCACGG TCTTGATAAA TCACTGGCAT TTACTATAAT GGAATTCGTT AGAAAAGGAC AGCCTTCAAA AAACAAAGAA AAGTGGGAAG AATATGCCAA GGCAATGAAG GAAAAAAACA TAAAAGAATG GTATATAGAA TCTTGCGAAA AGATAAAATA TATGTTCCCG AAAGGACATG CTGTGGCTTA TGTCATGATG GCAGTAAGAA TAGCATATTT CAAGGTATAT TATCCTCTTG AGTTTTATAC GGCATTTTTG AACAGAAAAG TAGACGGCTT CAGTGTTACC AAAATGTATA AGAAACTTGA CGAATTGAAA GAAGCCAGAA AGCTTCTTGA TGAAAAGATG AATCTTGACG TTAAGGAAAA AGGTGATCTG ACATTATATG AAATATTAAT AGAAATGAGC CACAGGGGAA TAGAACTGCT TCCTGTAGAT ATATATAAAT CAGAAGCCAG TTTATTTCTG GTGGAGGACG GGAAAATAAG GCTTCCGCTT GTTGCCGTGG ACGGGCTTGG GGAATCAGTC GCCAAAAAAG TAGTAGAAGA GAGAAAAATT TCAGAATTTA TTTCACTTGA AGATATATTA AAAAGAACAA AATTAAATAA AACTGTGGTG GAACTAATGA AACACTATAA GTTTCTGCCG GATATATCAC TTACAAACCA GCAGACATTA TTTTAA
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Protein sequence | MSIKYMKLKP SDDIYERLNI KSFSIEHINL FSKKKEMEVL IKIIHIDAFK EVMDLRRELT KTFSDSIRVK MKFLMNTVVE SDKLTSLVEF LLDNYKNESI RHQYIFSDYE IYYRNNKNIQ IELKSHHLIE QAVSQGIDKD LQIKLKEVTD REFKISFISE KEEGEFIAEA IEEYAVIMEE TFMVEDTTSQ SSTPVLYGEV IKSRIMDYSV FDQLQVGENM TIEGEVFNIN TRELKNDKLL ISFNVTNYKD SISCRLFLLK TEDLKLKNGE WVKLKGRVTQ DRFNIEDYYL IISSIERIPS RLERRKDEAE VKRVELHAHT NMSEMSGVVS AKDLINRAVE YGHNAIAVTD YGVAYSFPFA YKAAPKDFKV IFGVEAYVVD DEQNMVERPK DAMIEQEEYI IFDIETTGFD PYKDKIIEIG AVKLKGRNII DRFSAFVNPE VPIPEEIIKL TNITDDMVKD AELIDTVLPR FLEFCGDCTM VAHNAKFDVG FLTQKARQLE LEFLPSVIDT LYWARVLITD LKRFNLKALA NYFNISLDNH HRAVDDAEAT ASIFIKMLNM VLSKGILQIY EINDTFQNNV QTADTMNTMI LVKNREGLKD LYELISRSHL DFFGERKPRI PKSMLKEKRE HLLIASSANS VFRNDGELVR AYLRGMSKDE IEERADFYDY IEIHPAANYI EMVNNGEMES LDIAMEMNKY FYELGKKTGK IVVATGDAHY LEEWESVNRS VLILGSGMGH RSFKHDRKLY FRTTDEMLDA FAFLGEKEAY EVVIENTNKL ADMIERLKPI PDGFYPPKIE GAEEEVREMT YNRAKKLYGE NLPEILEKRI EHELEAIIGN GFAVLYLIAQ KLVKKSLDNG YLVGSRGSVG SSIVAYMMEI TEVNAMYPHY RCPNPECKHS EFTDMAGSGV DLPDKNCPKC GTKYIKDGHS IPFEVFMGFK GDKVPDIDLN FSGEYQSEIH RYTEELFGKD HVFRAGTIST LAERNAFGYV KKYFEESGIH KRKAEIERIA KGCEGARKTT GQHPGGMIVL PSDKSIYEFT PIQKPANDKT AESITTHFDY HVMDEQLVKL DILGHDDPTT LRILQDLTGI DIYQIPLDDP KVLSIFNSTE ALGVTQKDIG SVIGSFGIPE FGTKFVREML IETKPSSFAE LVRISGLSHG TDVWLNNAQD YVKAGITTLS EVITVRDDIM NYLIDHGLDK SLAFTIMEFV RKGQPSKNKE KWEEYAKAMK EKNIKEWYIE SCEKIKYMFP KGHAVAYVMM AVRIAYFKVY YPLEFYTAFL NRKVDGFSVT KMYKKLDELK EARKLLDEKM NLDVKEKGDL TLYEILIEMS HRGIELLPVD IYKSEASLFL VEDGKIRLPL VAVDGLGESV AKKVVEERKI SEFISLEDIL KRTKLNKTVV ELMKHYKFLP DISLTNQQTL F
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