Gene Sterm_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2016 
Symbol 
ID8597482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp2146237 
End bp2146965 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content36% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003308802 
Protein GI269120625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.47195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAA TAAAATATGA CAAGATATAT GAAGACCTTA AGGAAAAAAT CGAGTCGGAA 
GTATATAAAA ACCAGCAAAA GCTTCCATCT GAAAATAATT TGGTAAAGGA ATATAAATGT 
TCGCGCAATA CATTAAGAAG AGCAGTGGCA CAGCTGGCAT CAAGCGGTTA TGTACAGAGC 
CTTCACGGAA AAGGTGTGTA TGTAATATAT GAACAGCATA AAAAACCGGA TTTCATGCTT 
GGGGATATTG AGAGCTTTAA AGAGGCCGGC ATAAGAAACA GCAGTGAAAA TAAAACAAAA 
GTTGTCTGTT TTTCCGAGCT GACTGCTGAT GAGAGCATAA GCAGAAAAAC TGGTATTCCT 
GAAGGAACTG ATATATATTA TATTCAGAGA GTAAGATTTA TGGACAGTCA GGCATTGATA 
ATAGACCATA ATTATTACAG GAAAGATATA GTAAAGGATC TTACCCTGGA GATAGCAGAG 
GATTCCATAT ATGAATATAT AGAAAACGAG CTGAATGAAA AGGTAATTAC GACCAAACGT 
ATTATTACCG TGGAAAAAGC CGGAAAAGAC GATTTCAGAT ACCTGAATCT CCAAGAATAT 
AACTGTGTAG CGGTAATAAG TAATTATACC TATAATGCTG ACGGGATAAT GTTCGAGTAT 
ACGCAGTCAA GACACAGACC GGATTATTTT ATGTTTTTCG GGCAGGCGCA GAGAATAAAA 
AAGAGCTGA
 
Protein sequence
MGKIKYDKIY EDLKEKIESE VYKNQQKLPS ENNLVKEYKC SRNTLRRAVA QLASSGYVQS 
LHGKGVYVIY EQHKKPDFML GDIESFKEAG IRNSSENKTK VVCFSELTAD ESISRKTGIP 
EGTDIYYIQR VRFMDSQALI IDHNYYRKDI VKDLTLEIAE DSIYEYIENE LNEKVITTKR 
IITVEKAGKD DFRYLNLQEY NCVAVISNYT YNADGIMFEY TQSRHRPDYF MFFGQAQRIK 
KS