Gene Sterm_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1988 
Symbol 
ID8597454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2118391 
End bp2119590 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content38% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003308774 
Protein GI269120597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000688604 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATG ATTTTATAAA GGCAGAGGTC TCAAAGATTT TTGACGGGAT TGTAAAAATC 
AGAAGAGATA TACATATGAA TCCTGAGCTT GGGTTTGAAG AGACTGAAAC ATCGCAGAAA
ATAAAAGTTT TTTTGACAGA ACACGGATTA GAGGTACAGT CTGCTGCGGG AACAGGAATA
GTCGGTATAC TTCATAACGG CTTGGGAACA GTAGCTGCAA GCAGGGCTGA TATTGATGCA
CTTCCTATAA CAGAAGAAAA TGAAGTGGAA TATAAGTCCA GAATAAGCGG AAAAATGCAT
GCTTGCGGAC ATGATCTACA TACCGCGGTA CAGCTTGGGG CAGTAAAGTT TTTTGCCGAA
AACAGGGATA AATGGAAAGG AACAATAAAA TTTATTTTTC AGCCTGCCGA AGAAACAACA
GGGGGAGCTA AGCCTATGAT AGAAGAGGGA ATCTTAGAGA ATCCCAAGGT AGAATATATT
TTTGCACTTC ATGCCGCACC GGAGATAAAA ACAGGTAAAT TCGGTATAAA ATATGGAAAA
ATGCATGCTT CATCAGATGT ATTTGAAATA AAAATATACG GTGAATCAGC GCATGGAGCA
CTTCCGCAGA ACGGAACAGA TGCAATAGTA ATAGCTTCAC AGCTGATCAG CTATATACAG
ACAATAGTGA GCCGTAATAT AGATCCGAGA GAAGAGGCAG TTATTACCAT AGGTAAAATT
TCCGGAGGCA AAGCGGAAAA TATAATATGC GATCTTGTAG AGCTAAAGGG GACAATCAGA
ACTCTTTCTC CGGATATTAG AGAGTATATA CTAGATAAAA TGCGTAATAG CGTAGTAAAA
TTTGTGGAAA TTCTCGGCGG TAAAGCGGAG ATTTTCATAA GAAACGGTTA TGATTCTGTA
ATAAATAATG ATGAGGTTAC AGCAATACTG GAAAATAACA TAAAAGAGCT GTACGGGGAA
GACAGCATTG TAAAAATTGA TAAGCCGAGG ATGGATGTAG AGGATTTCAG CTTTTTTCTG
CAGAAAGCAA AGGGAGTGTT TTTCAGACTT GGCGTAAGAA ATGAAGAAAA AGGAATAATC
TATGATCTTC ATCATCCCAG ATTTAACGTT GATGAGGAAA GTATAAGATA TGGTATGGAA
CTGCAGATAA AAAATTTGAT AAGTGTATTG GAAATGGGTG AATATGAAAA AGGGAGATAA
 
Protein sequence
MSNDFIKAEV SKIFDGIVKI RRDIHMNPEL GFEETETSQK IKVFLTEHGL EVQSAAGTGI 
VGILHNGLGT VAASRADIDA LPITEENEVE YKSRISGKMH ACGHDLHTAV QLGAVKFFAE
NRDKWKGTIK FIFQPAEETT GGAKPMIEEG ILENPKVEYI FALHAAPEIK TGKFGIKYGK
MHASSDVFEI KIYGESAHGA LPQNGTDAIV IASQLISYIQ TIVSRNIDPR EEAVITIGKI
SGGKAENIIC DLVELKGTIR TLSPDIREYI LDKMRNSVVK FVEILGGKAE IFIRNGYDSV
INNDEVTAIL ENNIKELYGE DSIVKIDKPR MDVEDFSFFL QKAKGVFFRL GVRNEEKGII
YDLHHPRFNV DEESIRYGME LQIKNLISVL EMGEYEKGR