Gene Sterm_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1934 
Symbol 
ID8597401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2055071 
End bp2056129 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content41% 
IMG OID 
ProductPTS system, fructose subfamily, IIC subunit 
Protein accessionYP_003308721 
Protein GI269120544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000154962 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA TTGTGAAAAT TTTTAAGGAA ATCAGACAGC ATCTTATGAC AGGAGTATCT 
CATATGATAC CCTTCGTTAT AGCGGGAGGG ATATTACTGT CTTTGGCAGT TGTTCTGGGA
GGAAAGGGTA GTGTACCTGA GAATCCGATT CTAAAAGATA TTTTTGATAT AGGAGTAGCT
GGATTTGAAT TAATGATACC TATGCTTGCG GCATATATAG GATATTCAAT AGCAGGAAGA
TCAGCACTGG CACCGGCGGC TATAGCAGGG CTGGTAGGAA ATAAAATAGG TGCAGGATTT
TTAGGAGCTT TATTTGCCGG AATAATAGGC GGAATAGTAG TATTTTATCT GAAAAAAATA
AAAGTACCTG ATGTATTCAG ATCAATAATG CCGATTTTTG TGATGCCGCT GATAGGTACA
TTTATTACTG CGGGAATTAT GATGTGGGTA ATAGGGAAGC CGATTGCCAA TATAACGGTT
TTACTGACTG AATGGCTGCA GAATATGAGC GGAACTAATA CAATACTTCT GGCTGTTATA
CTGGGAATGA TGATAGCATT CGATATGGGA GGACCTGTAA ATAAGGTAGC ATTTTCGTTT
ATGATATTGT CGGTATCAGA GCAGATTTAT ACAATCCCCG CAATGATAGG GGTAGCTATA
TGTGTTCCTC CGATTGGCCT TGGAATATCA ACACTGATAG CACCTAAAAA ATACAGCGAC
GAGGAAAAGG AAACCGGTAA AGCCGCCATA CTTATGGGAC TTGTAGGAGT AACCGAAGGG
GCAATACCTT TTGCTGCTGC TAACCCTTTA AGAGTAATCC CGGCATTAAT GGCAGGAGCA
GCATGTGGAT CTGTGACAGC AGGTCTTCTC GGAGCAAAGC TCAGTTCTTC ATGGGGAGGA
CTAATAGTGC TGCCTACAGT GGAAAATAAA ATTGGTTATA TAATAGCCGT CCTTGTAGGA
GCTTCGGTAA CGGCAGTGAC AGCAGCGGCA CTAAAAAAAT CAGAAGCAGA AGAAGCAGTT
TCAGATATTG ATGATATAGA ATTGGAAATA GAATTTTAA
 
Protein sequence
MKDIVKIFKE IRQHLMTGVS HMIPFVIAGG ILLSLAVVLG GKGSVPENPI LKDIFDIGVA 
GFELMIPMLA AYIGYSIAGR SALAPAAIAG LVGNKIGAGF LGALFAGIIG GIVVFYLKKI
KVPDVFRSIM PIFVMPLIGT FITAGIMMWV IGKPIANITV LLTEWLQNMS GTNTILLAVI
LGMMIAFDMG GPVNKVAFSF MILSVSEQIY TIPAMIGVAI CVPPIGLGIS TLIAPKKYSD
EEKETGKAAI LMGLVGVTEG AIPFAAANPL RVIPALMAGA ACGSVTAGLL GAKLSSSWGG
LIVLPTVENK IGYIIAVLVG ASVTAVTAAA LKKSEAEEAV SDIDDIELEI EF