Gene Sterm_1859 details

Gene Information

• Locus tag: Sterm_1859
• ID: 8597328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1990740
• End bp: 1991333
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 38%
• Product: peptidyl-prolyl cis-trans isomerase cyclophilin type
• Protein accession: YP_003308648
• Protein GI: 269120471

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000317427
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TCACAATAAT TTTATTGATT TTTATGTTAT CATTATTATC AACAGCTAAC 
AAAATAAATA AGGAGGAGAA AGAGATGTCT GGTATTACAG CAGTAATAAA AACTAATAAG 
GGAACTATGA ATCTGGTGCT GTTTCCTGAA AAGGCACCTG TAACAGTTGC CAGCTTTGTG 
AATCTGGCAA AACACGGTTA TTATAACGGG TTAAAATTTC ACAGGGTAAT AGAGGACTTT 
ATGGCACAGG GAGGAGACCC TACAGGAACA GGTTCGGGAG GACCCGGATA TAAATTTGAG 
GATGAGGTAT ATAACGGACT GGACTTTTCC GAGCCCGGGA AACTGGCTAT GGCTAATGCA 
GGACCCGGAA CAAACGGCAG TCAGTTCTTT ATAACAACTG TGCAGACAAC ATGGCTGAAC 
AATAAGCATA CTATCTTCGG AGAATTAAAA TCAGAGGAAG ATATGAATAT CCTAAAATCA 
ATCACACAGG GAGATATAAT AGAACAGATT ACTATAAGCG GAGACGGTAC GGAAAAGCTT 
CTTGAAGAAA AGAAAGCAAG AATAGAGGAA TGGAATAAAA TACTCGGATA TTAA 

 

Protein sequence

MKKITIILLI FMLSLLSTAN KINKEEKEMS GITAVIKTNK GTMNLVLFPE KAPVTVASFV 
NLAKHGYYNG LKFHRVIEDF MAQGGDPTGT GSGGPGYKFE DEVYNGLDFS EPGKLAMANA 
GPGTNGSQFF ITTVQTTWLN NKHTIFGELK SEEDMNILKS ITQGDIIEQI TISGDGTEKL 
LEEKKARIEE WNKILGY