| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1758 |
|---|
| Symbol | |
|---|
| ID | 8597227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 1892069 |
|---|
| End bp | 1892989 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003308547 |
|---|
| Protein GI | 269120370 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000138196 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACAA AAAATGAAAT ATCAGGGCAT CTTTTTGCAC TGACCGCAAT ATTAGTATGG
GGAACAACCT TTACTTCAAC TAAAATATTA CTAAAAAGCT TTGCTCCTGT GGAGATATTA
TTTTTTCGTT TTATTATAGG ATTTACAGTA CTTTTTATAT TGTCGCCGCG TAAAATATCG
GTGAAAAATA TGAGACAGGA ATTGATACTT GCAGCTGCCG GATTCTGCGG GATAACAATG
TATTTTCTTA TGGAAAATAT AGCATTGCTG CATACTACAG CTTCCAATGC AGGAGTAATT
GTATCACTAT CACCATTTTT TACGGGTATT TTATCATTTT ATTTTTCAGA TGACGAGAAG
CTTGATGTAA GCTTTTTTAT CGGTTTTGTT ATAGCTTTAA CTGGGATAGG ACTTATTTCC
TTTAATGGAA TGATGAATCT GAACCTGAAT CCGATAGGTG ATTTTCTTGC CTTATTGGCA
GCATTTTTCT GGTCGCTGTA CTCGATATTA ATGAAAAAAG TCAGTAAATT CGGATACAGC
AATCTTGAAA GTACAAAGCG GGTATTTTTT TACGGCTTGT TTTTTATGAT TCCGGCTATA
TTAATATCTG ATTTTAAATG GGAATTTATC AGATTTGCAG ATCCTGTAAA TTTGTTTAAT
ATATTGTTTT TGGGTGCAGG GGCTTCGGCT CTGTGCTTTG CAGCATGGAA TACAGCTGTT
AATATACTGG GTGCTGTAAA AACAAGTGTG TATATTTATA TAGTACCTAT AGTTACAGTC
CTAAGTGCTG CATTGGTTTT GGGTGAGAAG CTGACGATTA TTTCTGTCTG CGGGGTAATT
ATTACATTTG CAGGACTGTT AATTTCAGAA AATAAAATTA ATTTTAAGAA AATAAGATCT
TTTGGAAAAG CAGAAGAATA G
|
|---|
| Protein sequence | MRTKNEISGH LFALTAILVW GTTFTSTKIL LKSFAPVEIL FFRFIIGFTV LFILSPRKIS
VKNMRQELIL AAAGFCGITM YFLMENIALL HTTASNAGVI VSLSPFFTGI LSFYFSDDEK
LDVSFFIGFV IALTGIGLIS FNGMMNLNLN PIGDFLALLA AFFWSLYSIL MKKVSKFGYS
NLESTKRVFF YGLFFMIPAI LISDFKWEFI RFADPVNLFN ILFLGAGASA LCFAAWNTAV
NILGAVKTSV YIYIVPIVTV LSAALVLGEK LTIISVCGVI ITFAGLLISE NKINFKKIRS
FGKAEE
|
|---|
| |