Gene Sterm_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1622 
Symbol 
ID8597091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1724710 
End bp1726626 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content36% 
IMG OID 
Productmethionyl-tRNA synthetase 
Protein accessionYP_003308411 
Protein GI269120234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAA AGTTTTATGT ATCAACACCA ATTTATTATC CTAATGCAAA GCCTCATGTG 
GGAACTGCAT ATACCACTAT AATTGCAGAT GTAACTGCAA GATATATGAG GCTTAAGGGT
TATGAAGTAA AGTTTTCTAC CGGGCTGGAT GAACACGGAC AGAAAATTCA GGAAGCAGCC
GAAAAAAACA ATGTTACTCC TCAGGAATGG GTAGACAGAA TGGCGGAAAA TTTTAAGGCA
CTATGGAAAA AATTAAATAT TTCAAATACA GAATTTATAC GTACTACAGA AGAACGTCAT
AAAATAAGCG TAAAAAAGAT GATAAAAAGA GTATATGAAA ACGGTGATAT ATATAAAGGA
GAATATAAGG GGCTTTACTG TGTATCGGAC GAAACATTCG TACCTGATAA CAGTGTACTT
GAAGGTAATA AATGTCCTCA TTGCGGAAAA GATCTTATAG AGGTAAAGGA AAATTCATAT
TTTTTTAAAT TATCAAAATA TCAGGACAGA CTATTAAAAT ATATAGAAGA AAATCCTGAT
TTTATACTTC CGTCTTACAG AAAAAACGAA GTAGTATCAT TTATAAATCA GGGACTTCAG
GATCTGTCAA TTTCAAGAAC GACTTTTAAC TGGGGAATAC CTCTTGAGCT GGAAGAAGGG
CATGTAATAT ATGTATGGTT TGATGCTCTT ACCAATTATA TAACTGTAGC CGGGTTCGGT
GATGACGAGA AAAAATTTGA GGATATATGG ATAGACGGTA AAGTTATGCA TCTTATGGGA
AAAGATATAC TGAGATTCCA TGCGATAATC TGGCCTGCGA TGCTTATGTC GGCAGGAATA
CCTCTTCCGG ATACTGTAGC AGCTCACGGA TGGTGGACTG TAGAAGGCGA GAAAATGTCA
AAGTCAAAGG GAAATGTTGT AGATCCTTTG GAAGAAGTGG AAAAATACGG ACTTGACCCT
TTCAGATATT ACCTAATGAG AGAAGTAACA TTTGGTCTTG ATGGTGATTA TTCGCAAAAA
GGGATGATTC AGAGAATAAA TGCTGATCTT GCCAATGATC TGGGAAATCT TCTGAACAGA
ACAATAGGAA TGCAGAAAAA ATATTTTGAT TCGGCAGTAG TACTTGAAAA GGAAGAAACT
GCACTGGAAG AAGAAATTTA TGCTCTGTGG AAAACAACTG TCGAGGATAT AGACACTTAC
TTTGAAAAGG TACAGTTTTC TGAAGTACTG AAAGCTGTTT GGAAATTTAT CTCAAGAATG
AATAAGTATA TAGACGAAAC AGCTCCGTGG ATACTGGCAA AAGATCCCGA AAATAAAAGC
AGGCTGTCCA CTGTTATGTA TAACCTTGTG GAGTCGTTAT ATAAAATTGC TGTTCTGATA
TCTCCGTTTA TGCCTGAAAC CGCACAAAAA ATGTGGAATC AGCTCGGGAT AAATGACAGT
ATAGAAAATA TCAGACTTGA TGATATTAAG CACTGGGGAG TTTATCCGGT AAATAATATA
CTTGGAGAAG CAACGCCTAT TTTTCCGAGA ATAGAAATAG AACCGGAAAA TAAAAAAGAA
GCTTTATTTA ATGAAAATCT TGAAGTGGAA AATCCTATAG GAATAGAGGA CTTTTCAAAA
GTACAGATAA AAGTGGTAGA AATATTAGCA GCAGATAAAA TAGAAGGTGC TGATAAGCTT
CTGAAATTTA TCATAAATAC AGGAACTGAA AAAAGACAGA TAGTTTCCGG AATTGCAAAG
TATTATCCGG AACCGGAGGA ATTAATAGGG AAAAAGGTTT TAGCTGTCAC GAATTTAGCC
CCTGTCACAT TAAGAGGGGA GCTGTCTCAA GGAATGCTTT TAACAACTGA GGAAAAGAAA
AGATTAAAGC TGATAGTAAT TGATGAACAG GTGAAAGTGG GGTCAGATAT AAAATAA
 
Protein sequence
MSKKFYVSTP IYYPNAKPHV GTAYTTIIAD VTARYMRLKG YEVKFSTGLD EHGQKIQEAA 
EKNNVTPQEW VDRMAENFKA LWKKLNISNT EFIRTTEERH KISVKKMIKR VYENGDIYKG
EYKGLYCVSD ETFVPDNSVL EGNKCPHCGK DLIEVKENSY FFKLSKYQDR LLKYIEENPD
FILPSYRKNE VVSFINQGLQ DLSISRTTFN WGIPLELEEG HVIYVWFDAL TNYITVAGFG
DDEKKFEDIW IDGKVMHLMG KDILRFHAII WPAMLMSAGI PLPDTVAAHG WWTVEGEKMS
KSKGNVVDPL EEVEKYGLDP FRYYLMREVT FGLDGDYSQK GMIQRINADL ANDLGNLLNR
TIGMQKKYFD SAVVLEKEET ALEEEIYALW KTTVEDIDTY FEKVQFSEVL KAVWKFISRM
NKYIDETAPW ILAKDPENKS RLSTVMYNLV ESLYKIAVLI SPFMPETAQK MWNQLGINDS
IENIRLDDIK HWGVYPVNNI LGEATPIFPR IEIEPENKKE ALFNENLEVE NPIGIEDFSK
VQIKVVEILA ADKIEGADKL LKFIINTGTE KRQIVSGIAK YYPEPEELIG KKVLAVTNLA
PVTLRGELSQ GMLLTTEEKK RLKLIVIDEQ VKVGSDIK