Gene Sterm_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1530 
Symbol 
ID8597000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1625468 
End bp1627747 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content35% 
IMG OID 
Productglycoside hydrolase family 65 central catalytic 
Protein accessionYP_003308320 
Protein GI269120143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATA AATGGAGAAT AGAAGAGAAT GTATTTTCAG AAAAAACATC AGGAAAGCAT 
GAGGCATTGA TGACTCTGGG AAATGGTTAT ATGGGAATCA GAGCAGGATT TGAGGAAGAA
TATGCCGGTC AGAAGAGGGG CTTTTTTATA GCCGGAACTT ATAACAGGGC GGGTCTGAAT
GAAGTCGCCG AGCTTCCTAA TGCTGCTGAT ATAACAGCAT TTGAAATAAT TATTGATAAT
GAAAGATTCA GTCTTTTGAA AGGGAAAATA CATGAATATA ATTTTACTCT TGATATGAAA
ACAGGAGAAC TGAAAAGAGA GCTTGTATGG GAAAATACAG GAAATAAGAA ATTTAAAATG
ATTTTCAGGC GTTTTGTATC CTTGGAAAAC AGACATCTTG TATGTTCGAA GGTGAGTATA
GAGGCTCTTG ATGAAGACAG TAATGTAAAA ATAAAAACCG GCGTTGACGG AAGACAGACT
AATTCAGGCG TACAGCATTT TCATGAAATG GAGAAGAGAG TGTATGATGA TAAATTTATC
CAATATGTAC AGAGGACAAC TGAAAGCAAT ATAGATATGT ACCTTAATAC ATTTTTGCAT
ATAAATCCGG TTTTAGAGAA GTCTTTTACA ATAGAACGGC GGAAGCTTCT GGCAGAAATC
ACAGGAGTTA TAAGGAAAAA AGAAATTTTA GAAATAGAAA AAATTTCTTT GGTTTATACA
TCTGTTGATA AGGAATTCAT TAATAAAGAT ATTAATATCG GAGAATATTC TCTGGATAAG
ATAAGAGAAC TGAAGGACAG CAGATATAAC GAGCTGTTTC ATAGCAGCTC GGAAAGCTGG
AATAATTTTT GGGAAAAAAG CGAAATTAAT ATAGAAAGCA GTGATGAATT CGATAATTTT
GCAGTAAATT TTTCATTATA CCATATGCAG ATTATGACCC CGTTTCATGA TAACAGATTC
AGCGTAGGCG CAAAGGGTCT GACTGGCGAA GGATATAAAG GGCATGTTTT TTGGGATACA
GAAATATTTA TGCTTCCGTT TTTTCTTTAT ACTAACCCTG AAACAGCAAA ACAGCTTTTG
GAGTACAGAT ATGGAAATCT TGATGAAGCA CGTAAAAAAG CAGCTTCCAA AAACTGCAGA
GGGGCATTGT TTCCTTGGGA AAGTGCTTTT GACGGAAAAG AAGAAACACC TGAATTTGCA
GCAATAAATA TAAAAACAGG AAAAGCAAAC AGAGTATGGT CTGCGGAAAA AGAGATACAT
ATAGTGGCAG ACATAGCCTA TGCAGTCATA GAATACTTTC ATGTAACAGG GGATACAGAA
TTTATGAAAA GTGCAGGTCT GGAAATACTG GCTGAATGTT CTGAATTCTG GGTAAGCAGA
GCAGAGATCG ATTCTAAAAC AGGTAAATAT GTAATAAAGG ATGTAATAGG GCCTGATGAG
TATACAGAGC ATATTGATAA TAATACGTAT ACTAATTATA TGGCAGAATA TACAGTTTCT
GAAACTGCAA AATTATTAGA AAGCTTTGAG AATAAAAAAG ATAAAATATA TTTGAAGCTG
GCTGAAAAAC TCGGCTTAGA AGAAAAAATA CCATTATTCA GGGATTTTGC CGCGAATATC
TATCTTCCTG AGCCTGCTGA AACGGGTATA ATTCCTCAGG ACGATACTTT TCTTTCAAAA
AAAATAATAG ATATAAGCAG ATATGCGGAC AGTGATTCAA AACAGGGGAT ACTAAAAGAT
TATACACGTG ATGAGGTAGT GGATATGCAG GTATTAAAAC AGGCAGATCT TGTGATGTTT
TTATACTTCT TTAAAGATAA ATTCGATAAG GATATTATCA GAAAAAACTG GAATTATTAT
GAAAGCAAAA CAATTCATGA TTCATCGCTA AGTATGGCTA TCCATGCGAT AACAGCTTTA
TATTTCGGAG AAAAGGAAAC TGCTTACAAG TGTTTTCAAA AAGCCTGTCT TATAGATCTC
GGTCCAAATC CGCATTCTTC GGATGACGGA ATACATGCTG CCTCTCTTGG TGCTGTATGG
CTCACATGTA TAAAGGGCTT TGGGGGAATA AGTGAAAATG GCGGAATGCT GAATATAGAG
CCTGTACTTC CTGATAACTG GGAAAAACTT GAATTTCCTC TGGTTTTTAG AAAAAAAGCA
TTCAGGATAA AAATAGATAA AAAATCTGTA GAATTATTTT CAGAAAGTAA TGATATTCTG
GAAATATTTA TTAATAAGCA AAAGTATGAA TTAAAAGATT ATCTCAGGGT TTTATATTAA
 
Protein sequence
MIDKWRIEEN VFSEKTSGKH EALMTLGNGY MGIRAGFEEE YAGQKRGFFI AGTYNRAGLN 
EVAELPNAAD ITAFEIIIDN ERFSLLKGKI HEYNFTLDMK TGELKRELVW ENTGNKKFKM
IFRRFVSLEN RHLVCSKVSI EALDEDSNVK IKTGVDGRQT NSGVQHFHEM EKRVYDDKFI
QYVQRTTESN IDMYLNTFLH INPVLEKSFT IERRKLLAEI TGVIRKKEIL EIEKISLVYT
SVDKEFINKD INIGEYSLDK IRELKDSRYN ELFHSSSESW NNFWEKSEIN IESSDEFDNF
AVNFSLYHMQ IMTPFHDNRF SVGAKGLTGE GYKGHVFWDT EIFMLPFFLY TNPETAKQLL
EYRYGNLDEA RKKAASKNCR GALFPWESAF DGKEETPEFA AINIKTGKAN RVWSAEKEIH
IVADIAYAVI EYFHVTGDTE FMKSAGLEIL AECSEFWVSR AEIDSKTGKY VIKDVIGPDE
YTEHIDNNTY TNYMAEYTVS ETAKLLESFE NKKDKIYLKL AEKLGLEEKI PLFRDFAANI
YLPEPAETGI IPQDDTFLSK KIIDISRYAD SDSKQGILKD YTRDEVVDMQ VLKQADLVMF
LYFFKDKFDK DIIRKNWNYY ESKTIHDSSL SMAIHAITAL YFGEKETAYK CFQKACLIDL
GPNPHSSDDG IHAASLGAVW LTCIKGFGGI SENGGMLNIE PVLPDNWEKL EFPLVFRKKA
FRIKIDKKSV ELFSESNDIL EIFINKQKYE LKDYLRVLY