Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1480 |
Symbol | |
ID | 8596953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 1568287 |
End bp | 1569336 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | secretion protein HlyD family protein |
Protein accession | YP_003308273 |
Protein GI | 269120096 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.785095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG AAAATACATT TTCAGCAATA AAAAATAAGA AAAATTGGCT GTTTGTAATA GTTATTTCAG CAATAATTTT CTGCGGCTGG TTTATATACA GCAAACAAAA TAAAAGCGAA GAAATTATAT TATACGGGAA TGTAGATATC AGACAGGTCT CACTGGCTTT TAACGCTAAT GAAAGAATAG ATCAAATATA CGTAGAAGAA GGAGATATCG TAAAAAAAGG TCAGCTGCTG GCAAGTCTTG ACACCGAAAA TATAAAACTC CAAATAGAAA AAAATAAATC TCAGATTGAA GCTCAGGAAA GCATAGTATC ACGCTTAAAG AATGGTTCAA GACCGCAGGA GAAGTCTCAA ATGTTAGCAA AAGTGAATGC TGCAAAAGCT GAAGCTCAAA ATGCAAAAAT ACAGTTACAA AGAATTGAAA ATGCCTATAA TGATTCAGAC GGCCGTTCAG TAAGCAAACA GGAAATAGAT AATGCAAGAT CGAATTTTAA AGTAACTTCA GCACGTGTAA AGGAAACTTC CGAATCTTAT CGTCTTGCAG TATTAGGACC TCGTAAGGAA GAAATTACAG AAGCGGAGGC CCGGCTGAAA GCTGAAAAAG CTGAATTAGC AATACAGGAA TATTTATTGG AACAAGCTCA ATTAAAATCA CCGATTGACG GAGTTATACG TTCCCGGCTG CAGGAGCCGG GAGATATGGC ATCACCTCAG CAAATCACTT TCCTTCTCGC TGTAAATGAC AAAAAATGGG TAAGAGCATA TATTCAGGAA AAACAATTAG GATATATTAA CGAGGGAATG GAAGTCAGCG TCTATATTGA CAGCTATTCA GACAAACCTA TAAAAGGGCA GATCGGATAT ATATCTTCAG TTGCGGAATT CACTCCTAAA ACTGTACAGA CAGCAGAATT AAGAACTTCT TTGTTATATG AAATCCGTGT TTACGTGAAG GACAGCGAGG ATATACTGCG TATGGGTATG CCTGCTACAA TAAAAATCAA TTCCTATAAC ACGGCAGACA GTAAGGAGAA AAATTTATGA
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Protein sequence | MNKENTFSAI KNKKNWLFVI VISAIIFCGW FIYSKQNKSE EIILYGNVDI RQVSLAFNAN ERIDQIYVEE GDIVKKGQLL ASLDTENIKL QIEKNKSQIE AQESIVSRLK NGSRPQEKSQ MLAKVNAAKA EAQNAKIQLQ RIENAYNDSD GRSVSKQEID NARSNFKVTS ARVKETSESY RLAVLGPRKE EITEAEARLK AEKAELAIQE YLLEQAQLKS PIDGVIRSRL QEPGDMASPQ QITFLLAVND KKWVRAYIQE KQLGYINEGM EVSVYIDSYS DKPIKGQIGY ISSVAEFTPK TVQTAELRTS LLYEIRVYVK DSEDILRMGM PATIKINSYN TADSKEKNL
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