Gene Sterm_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1479 
Symbol 
ID8596952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1566521 
End bp1568290 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content38% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003308272 
Protein GI269120095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAG AAAATGTAGT TATTGCAGAA AATTTATATA AACGTTTTAT TGCCAAGCCA 
TCCAAAAAAA CGATAAATGC TCTCACAAAT ATAAATATTA AAATTCCGGC AGGAAAGCTT
ACTGCATTAA TCGGACCAGA CGGAGCAGGC AAAAGTACAT TTATGCGTCT AATATGCGGT
CTTATGACTC CCAGCGAGGG AAATCTCACA GTTCTTGGAA TAAATACAAA AGACAATCCT
CAGGAAATTC AAAACAGAAT CAGTTATATG TCACAGCGCT TCGGGCTTTA TGAAGATTTA
AGCATTCAGG AAAATCTTGA TCTTTATGCT GACTTGCACG GAGTATCAAA AAAAGAACGC
AGAGAACGTT TTGACGAACT TTTGAAAATG ACAGGTCTGG AAGCTTTTAC CAAAAGACAG
GCAGGAAAGC TTTCCGGCGG AATGAAACAG AAGCTCAGCT TAGCCTGCAC ATTAGTCCGT
TCTCCCGAGC TTTTGCTGCT GGATGAACCA ACAGTAGGAG TCGACCCTCT TTCGAGAAGA
GAACTGTGGG AAATTCTTCA AAAGCTTGTG CAAAAGGAAA AACTTACAGT TCTTGTGAGT
ACAGCTTATA TGGATGAAGC TGAGCTTTGC CAAAAAACTA TAGTGATGCA TAAAAGCAAA
GTATTAGATG TGGGAACTCC GGAAGGACTG CGAAGAAAAG CTGCAGATAA ATGCTTTAAA
ATTCAGCCGC CTAAAAGCAT GCCTTCCAGA TTAATACAGA CAAAATTACT TGATGATAAA
GAAAATATTA TTGATGCTGT TCCTGAGGGC GGAGCCGTGA GATTTATCAT TCGCTCAAAA
AAAGCTTTTG ATAATATAAA AAAAATTGAC GGCAATTTAG AAATCCAGAA GGTAGATTCC
AGATTGGAGG ACGGATTCAT GACCTTGTTA AGTGAATATG AAAATGAACA TAATGATGAT
GATGATAATA TCAAAGAGAA ATTCCATATA GAATTTCCTG ACAAGTTTGA AATATCAGAT
CAGGTTGATA TAGAAGTTAA TAATCTGGTA TGTAAATTCG GTGATTTTAC TGCTGTAGGA
AATACATCCT TTCAGGTACA TAAAGGAGAA ATATTCGGAC TTTTGGGTCC AAACGGTGCC
GGAAAAACAA CAACATTCAG AATGCTGTGC GGTTTACTGC CTTTGACAAG CGGCAGTCTG
TCAGTAGCCG GTGTCGATTT GAGAAAGGCC AGAACTCAGG CCAGAGCAAA TATTGGATAT
GTTGCACAAA AATTTTCTTT ATATTCAACT CTATCTGTAG AAGAAAATCT AAAATTTTTT
GGCGGAGTTT ACGGTTTGAA AAGAGAAAAA CTGAAAAAAA GAATGGAAGA GGTAAAAGAG
CAGTTTGAAC TCACAGGAAT GGAAACAAAG CCGAGCGGAG AACTTCCGGG AGGATTTAAA
CAGCGTTTAT CAATGGCTGT AGCACTTCTT CATGAACCAA AAATACTTTT TCTTGATGAA
CCGACCAGTG GTATTGATCC TTTGGCAAGG CGTTCTTTCT GGTATCAAAT AACAGCTCTT
GCAGCTGAAG GAACTACAAT AATAATTACC ACACATTTTA TGGAAGAAGC AGAGTACTGC
GACCGTATTA TGATACAGGA TCAGGGAAAA ATGCTGGTAC TGGGCACCCC TCAGGAAGTA
AGAGAAAATG CCGGAGAAAA TGTAAAAACA ATGAATCAGG CTTTTATTGA AATAATAGAA
CAGAATCGTT TACAAAATAA AATTATTTAA
 
Protein sequence
MNTENVVIAE NLYKRFIAKP SKKTINALTN INIKIPAGKL TALIGPDGAG KSTFMRLICG 
LMTPSEGNLT VLGINTKDNP QEIQNRISYM SQRFGLYEDL SIQENLDLYA DLHGVSKKER
RERFDELLKM TGLEAFTKRQ AGKLSGGMKQ KLSLACTLVR SPELLLLDEP TVGVDPLSRR
ELWEILQKLV QKEKLTVLVS TAYMDEAELC QKTIVMHKSK VLDVGTPEGL RRKAADKCFK
IQPPKSMPSR LIQTKLLDDK ENIIDAVPEG GAVRFIIRSK KAFDNIKKID GNLEIQKVDS
RLEDGFMTLL SEYENEHNDD DDNIKEKFHI EFPDKFEISD QVDIEVNNLV CKFGDFTAVG
NTSFQVHKGE IFGLLGPNGA GKTTTFRMLC GLLPLTSGSL SVAGVDLRKA RTQARANIGY
VAQKFSLYST LSVEENLKFF GGVYGLKREK LKKRMEEVKE QFELTGMETK PSGELPGGFK
QRLSMAVALL HEPKILFLDE PTSGIDPLAR RSFWYQITAL AAEGTTIIIT THFMEEAEYC
DRIMIQDQGK MLVLGTPQEV RENAGENVKT MNQAFIEIIE QNRLQNKII