Gene Sterm_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1478 
Symbol 
ID8596951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1565380 
End bp1566507 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content34% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003308271 
Protein GI269120094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA ATAATTTTTT AGTACGTCTT ACTGCAATGA TAAAAAAAGA ATTCCGGCAG 
TTAATACGTG ACAACAGCAG CATTTTAATC GGAATATTTT TACCTATTAT CCTTATATTC
ATTATAGGCT ACGGGGTAAC ACTCGATGTT AAAAATGTTC CTGTGGCAGT TGTACTTGAA
GATACATCAC CTACGGCTCA TGATGTTTTA AGCTTTCTTA ACGGCTCTGA ATACTTCTCT
CCAATTTATG TAACATCTAT GTATGAAGCA GTAGAATTAA TGGATGATCG AAAAGTCGAT
GCTGTTCTAA AAATCCCGTC TGATTTTTCA GAAAATTTAT ATAAACAAAA AAGCTCAATA
CAATTAATTT TGTATGGTGT AGACTCCAGT ACTGCCACTA CTGTAAAAGG ATATATCGAA
GTCTCTATAA AACAATGGGA GGCATTAAAT AATTCTGCTT TCATGAATAG TCCAAGTGCA
GGTAATATTC TTATTGAAAA CAGAATGTGG TTTAATGATT CCAATTCAAG CACATGGTAT
TTTATTCCGG GCTTGATAGT GCTTATAATG ACAATTGTAG GAGTTTTTTT GACTTCGCTT
GTTATGGCAC GTGAATGGGA GCGCGGAACA CTGGAATCAT TATTTATTTC TCCCATAAAA
CCCTTAGAAA TATTATTATC AAAAATGATT CCGTATTTTT GTACGGCTAT GATTGGCTTT
TCACTCTGCT TAGTTGCCGC ACGCGTTTTA TTTAAAGTTC CTATACACGG CTCACTGCTT
ATAATCATAT TTTGTTCCAT GCTTTATTTG TTCGTATCCT TGGGAATGGG ACTTATTATA
TCCTCTATCA CAAAAAATCA ATTTTTAGCA AGCCAGGTAG CATTAGTTGT AAGCTTTTTA
CCTGCAATGA TGCTGACAGG ATTTTTATTT GATCTGCGGA GTGTCCCAGT TTTTATCCGG
AATATAGGGC AGATACTCCC GGCAACATAT TATTTGCAAT TACTTAAATC ACTTTTTCTT
GGCGGAAATA ATTGGAACTT AATTTTGAAA AACTGTTTAA TACTATCTGC TTATGCTGTA
TTTTTTGTTT CTACAGCATT AAAAGTGACA AAAAAGAGCC TTGAATAA
 
Protein sequence
MFKNNFLVRL TAMIKKEFRQ LIRDNSSILI GIFLPIILIF IIGYGVTLDV KNVPVAVVLE 
DTSPTAHDVL SFLNGSEYFS PIYVTSMYEA VELMDDRKVD AVLKIPSDFS ENLYKQKSSI
QLILYGVDSS TATTVKGYIE VSIKQWEALN NSAFMNSPSA GNILIENRMW FNDSNSSTWY
FIPGLIVLIM TIVGVFLTSL VMAREWERGT LESLFISPIK PLEILLSKMI PYFCTAMIGF
SLCLVAARVL FKVPIHGSLL IIIFCSMLYL FVSLGMGLII SSITKNQFLA SQVALVVSFL
PAMMLTGFLF DLRSVPVFIR NIGQILPATY YLQLLKSLFL GGNNWNLILK NCLILSAYAV
FFVSTALKVT KKSLE