Gene Sterm_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1343 
Symbol 
ID8596819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1429878 
End bp1430762 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content34% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003308139 
Protein GI269119962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA AGGACAGCTA TCATCCGTAT GCAATAATTA CGATTGTATT TTGGTCATTG 
GCGTATGTAT TAACAAGACT GACATTACAG TATTTTTCGT CTTTTTCTCT GGGATTTTTA
AGATACTTTA TTGCTTCTTG TGCTCTACTC TGCATTGCCT TTATAACAAA AATGAAATTC
CCTTCAAAAA AAGACTTTCC CTGGTTTTTA CTGGCAGGAG CAGTGGGATT TTTCATTTAT
ATAATTACGT TTAATAAAGG GCAGGAAAGT ATATCAGCTT CCACAGCAAG CGTTGTTATA
GCTACAGTTC CTGTTATTAC AGCGGTATTA GCACGTTTTA TTTATTCTGA AAAACTAAGC
TGTATTCAAT GGGGAGCTAT TATCATTGAG CTCATAGGAG TATGTATTTT GACATTGCTA
AAGGGGATAT TTTCTATTAA TATAGGATTG TTATGGCTCT TTCTGGCTGC ATTAGTACTA
AGCATATATA ACTTAATACA GCGCAGGCTT ACAAAAAAAT ATACAGCATT ACAGACTTCT
TCTTTCAGCA TTTTCAGCGG AACAATACTG CTGGCTGTTT TTATGCCTGC TTCTCTGAGA
GAGGTTTTAC ACGTACCTTT TATACAATTA TTCTATGTTG TATTATTAGG TGTATTTTCC
AGTGCGATTG CATATATTGC ATGGTCAAAA GCATTTTCAA AAGCAAGACA GACCTCGGAT
GTAAGTAATT ATATGTTTGT TACACCATTT TTGACAAGTA TTTTAGGTTT TTTTATTGCA
AATGAAATTC CGGAATATTC GACTCTGATC GGAGGAGCAG TAATTCTTTT CGGAATTTTA
GTCTTTAATT TTGGTGATAA AATATACGGG CTTCTATACA AGTAA
 
Protein sequence
MKFKDSYHPY AIITIVFWSL AYVLTRLTLQ YFSSFSLGFL RYFIASCALL CIAFITKMKF 
PSKKDFPWFL LAGAVGFFIY IITFNKGQES ISASTASVVI ATVPVITAVL ARFIYSEKLS
CIQWGAIIIE LIGVCILTLL KGIFSINIGL LWLFLAALVL SIYNLIQRRL TKKYTALQTS
SFSIFSGTIL LAVFMPASLR EVLHVPFIQL FYVVLLGVFS SAIAYIAWSK AFSKARQTSD
VSNYMFVTPF LTSILGFFIA NEIPEYSTLI GGAVILFGIL VFNFGDKIYG LLYK