Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1186 |
Symbol | |
ID | 8596665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1288953 |
End bp | 1291118 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_003307985 |
Protein GI | 269119808 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000400543 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAA TAAAAGAGAG ATTTGCTGAA CTGGAAAAAA AGATTAAAGA AAATAATCTG GATGTTGATG TAGACAAAAT TGAGAATGCC TTTGTGCTGG CATATGAATC ACATGTGGGA CAGAAGAGAA AAAGCGGGGA AGATTATATC CTGCATCCTA TTGAAGTAGC GGAAATTCTG GTAGACTTGA GGCTTGATAC TGACACTATA GTGGCAGGTA TTTTGCATGA TGTAGTGGAA GATACGCTTA TTACAATTCC GGATATAGAA TATAATTTTG GAAAAGAAGT GGCAAGGCTG GTAGACGGAG TAACAAAATT ACGTAATCTT CCCAGAACAG ACAGCAGCAA AAGAATAGAA AATATACGAA AAATGGTCGT GGCTATGTCT GAAGATATAA GAGTAGTATT AATAAAGCTC GCTGACAGGC TCCATAATAT GAGAACACTT AAATATATGA AACCGGAAAA GCAGATAGAA AAGGCCAAGG AATCATTGGA AATATATGCA CCCATAGCAC ATAGAATAGG AATGGCGAAA ATAAAATGGG AATTGGAGGA TATAAGCTTT AGGTATCTTT ATCCGGAAAA ATATAAGGAA ATAAGCACTC TTGTAAAAAC AAAGAGAAAA GAACGTGAAA AGTATACCAA TGAGGTAATA GAGAAGATAT CCGGCGAACT GAAGAAATTT AATATTCAGG GGGAAGTAAC CGGAAGACCG AAGCATCTTT ACAGTATATA TAAAAAGATG GTGGAGAAGC AGAAAAATTT TAATGATCTT CATGACCTTA TTGCTATCAG GATTCTTGTT AATAAAGAAG TGGAATGTTA CAATGTTCTT GGAATAATAC ACAGTCTGTA TATACCTGTG GCTGGAAGAT TTAAGGACTA CATAGCTGTT CCTAAGTCTA ACGGCTATCA GTCAATACAT ACTACTATAG AAGGACCTGA TAAACAGAAT ATAGAGGTGC AGATAAGAAC TTATGCCATG CACATGATAG CAGAAGAAGG GGTTGCCGCA CACTGGAAAT ATAAAGAGAA AAAGAGCAAG AGCAAAGATG AGAATTATTA TGCCGCAGTA AAGAAAATGA TTGCCGGTAA TGAGAATGTT GATAGTTTTG TGAAAGAAGT TACTGATAAT GTATTAAATG AAACTATATT TGTTTTCACG CCGAAAGGTG ATGTCATAGA GCTTCAGAAT GCAGCTACGC CTTTGGATTT TGCATTTCAT ATACATACAC AGATTGGATA TAAAACCGTA GGGGCTAAAG TCAACGATAA AATAGTTCCT TTGGATTACG AGCTGAAAAA CGGTGATAAA ATAGAAATAC TTACTTCAAA AAACAGTAAG GGGCCTGGTA AAGACTGGAT AAATATGGTA AAGGCAAACA GCTCAAAAGT AAAAATCAGA AAATGGTTTA AGGATAAGGA ATTTGAAGAA AGAACAAAAG ACGGAGAGCT GCTCCTTGAA CGCGAGCTGG AAAAAATAAA TCTGAAATTT AAGGATATAG AAGAAGATGA GAAGCTTTTT CTATATATGA AAAAATATAA TATAAATGAT ACAAAATCTT TATTTTATAA ATTTGCTACA GGTGAATTGT CACTGGAAGG CTTTACAAAC AGATTTGAGG TAAAGAAAGA GCTGGATGAG AAGCAGGTTC TGGAAGAAGA AACTCTGAAA GGAAATAAAA GGAAGGAAAA AAGTACAGGC GGTATCAGAA TAAGCGGAAC TGACAATACT ATGTATAAAT TTGCCAAATG CTGTACCCCG CTTCCGGGAG ATGATATACA GGGCTTTGTG ACAAAGGTAA GAGGAATAGT AATTCACAGA AAAGACTGTA AAAATCTCCA TAATCTTTTG AAAAATGATC CTGACAGAGC GATTGACGTG GAGTGGGATG TAGAGGAAAT CGGGAAGTCT ACTTCAAAAT ATGAATTTGT ATTTACTGCG AAAGCACTTA ACAGACCTAA TATTCTAATG GATATAATAA AGGTACTTAA TGACTTTAAG ATGGATCTGA TAAATGTAAA TACCACTGTA ACAAAGGAAA ACGGAATAGA ATATTCACTT ATGAAATTTG ATATTATGAT AAAAAAACGT GATGACTTTG ACAGACTGGC AAATAATCTG AAGTCAATGA AAGACATCGT TGATATAATA AGATAA
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Protein sequence | MRIIKERFAE LEKKIKENNL DVDVDKIENA FVLAYESHVG QKRKSGEDYI LHPIEVAEIL VDLRLDTDTI VAGILHDVVE DTLITIPDIE YNFGKEVARL VDGVTKLRNL PRTDSSKRIE NIRKMVVAMS EDIRVVLIKL ADRLHNMRTL KYMKPEKQIE KAKESLEIYA PIAHRIGMAK IKWELEDISF RYLYPEKYKE ISTLVKTKRK EREKYTNEVI EKISGELKKF NIQGEVTGRP KHLYSIYKKM VEKQKNFNDL HDLIAIRILV NKEVECYNVL GIIHSLYIPV AGRFKDYIAV PKSNGYQSIH TTIEGPDKQN IEVQIRTYAM HMIAEEGVAA HWKYKEKKSK SKDENYYAAV KKMIAGNENV DSFVKEVTDN VLNETIFVFT PKGDVIELQN AATPLDFAFH IHTQIGYKTV GAKVNDKIVP LDYELKNGDK IEILTSKNSK GPGKDWINMV KANSSKVKIR KWFKDKEFEE RTKDGELLLE RELEKINLKF KDIEEDEKLF LYMKKYNIND TKSLFYKFAT GELSLEGFTN RFEVKKELDE KQVLEEETLK GNKRKEKSTG GIRISGTDNT MYKFAKCCTP LPGDDIQGFV TKVRGIVIHR KDCKNLHNLL KNDPDRAIDV EWDVEEIGKS TSKYEFVFTA KALNRPNILM DIIKVLNDFK MDLINVNTTV TKENGIEYSL MKFDIMIKKR DDFDRLANNL KSMKDIVDII R
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