Gene Sterm_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1186 
Symbol 
ID8596665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1288953 
End bp1291118 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content35% 
IMG OID 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_003307985 
Protein GI269119808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000400543 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA TAAAAGAGAG ATTTGCTGAA CTGGAAAAAA AGATTAAAGA AAATAATCTG 
GATGTTGATG TAGACAAAAT TGAGAATGCC TTTGTGCTGG CATATGAATC ACATGTGGGA
CAGAAGAGAA AAAGCGGGGA AGATTATATC CTGCATCCTA TTGAAGTAGC GGAAATTCTG
GTAGACTTGA GGCTTGATAC TGACACTATA GTGGCAGGTA TTTTGCATGA TGTAGTGGAA
GATACGCTTA TTACAATTCC GGATATAGAA TATAATTTTG GAAAAGAAGT GGCAAGGCTG
GTAGACGGAG TAACAAAATT ACGTAATCTT CCCAGAACAG ACAGCAGCAA AAGAATAGAA
AATATACGAA AAATGGTCGT GGCTATGTCT GAAGATATAA GAGTAGTATT AATAAAGCTC
GCTGACAGGC TCCATAATAT GAGAACACTT AAATATATGA AACCGGAAAA GCAGATAGAA
AAGGCCAAGG AATCATTGGA AATATATGCA CCCATAGCAC ATAGAATAGG AATGGCGAAA
ATAAAATGGG AATTGGAGGA TATAAGCTTT AGGTATCTTT ATCCGGAAAA ATATAAGGAA
ATAAGCACTC TTGTAAAAAC AAAGAGAAAA GAACGTGAAA AGTATACCAA TGAGGTAATA
GAGAAGATAT CCGGCGAACT GAAGAAATTT AATATTCAGG GGGAAGTAAC CGGAAGACCG
AAGCATCTTT ACAGTATATA TAAAAAGATG GTGGAGAAGC AGAAAAATTT TAATGATCTT
CATGACCTTA TTGCTATCAG GATTCTTGTT AATAAAGAAG TGGAATGTTA CAATGTTCTT
GGAATAATAC ACAGTCTGTA TATACCTGTG GCTGGAAGAT TTAAGGACTA CATAGCTGTT
CCTAAGTCTA ACGGCTATCA GTCAATACAT ACTACTATAG AAGGACCTGA TAAACAGAAT
ATAGAGGTGC AGATAAGAAC TTATGCCATG CACATGATAG CAGAAGAAGG GGTTGCCGCA
CACTGGAAAT ATAAAGAGAA AAAGAGCAAG AGCAAAGATG AGAATTATTA TGCCGCAGTA
AAGAAAATGA TTGCCGGTAA TGAGAATGTT GATAGTTTTG TGAAAGAAGT TACTGATAAT
GTATTAAATG AAACTATATT TGTTTTCACG CCGAAAGGTG ATGTCATAGA GCTTCAGAAT
GCAGCTACGC CTTTGGATTT TGCATTTCAT ATACATACAC AGATTGGATA TAAAACCGTA
GGGGCTAAAG TCAACGATAA AATAGTTCCT TTGGATTACG AGCTGAAAAA CGGTGATAAA
ATAGAAATAC TTACTTCAAA AAACAGTAAG GGGCCTGGTA AAGACTGGAT AAATATGGTA
AAGGCAAACA GCTCAAAAGT AAAAATCAGA AAATGGTTTA AGGATAAGGA ATTTGAAGAA
AGAACAAAAG ACGGAGAGCT GCTCCTTGAA CGCGAGCTGG AAAAAATAAA TCTGAAATTT
AAGGATATAG AAGAAGATGA GAAGCTTTTT CTATATATGA AAAAATATAA TATAAATGAT
ACAAAATCTT TATTTTATAA ATTTGCTACA GGTGAATTGT CACTGGAAGG CTTTACAAAC
AGATTTGAGG TAAAGAAAGA GCTGGATGAG AAGCAGGTTC TGGAAGAAGA AACTCTGAAA
GGAAATAAAA GGAAGGAAAA AAGTACAGGC GGTATCAGAA TAAGCGGAAC TGACAATACT
ATGTATAAAT TTGCCAAATG CTGTACCCCG CTTCCGGGAG ATGATATACA GGGCTTTGTG
ACAAAGGTAA GAGGAATAGT AATTCACAGA AAAGACTGTA AAAATCTCCA TAATCTTTTG
AAAAATGATC CTGACAGAGC GATTGACGTG GAGTGGGATG TAGAGGAAAT CGGGAAGTCT
ACTTCAAAAT ATGAATTTGT ATTTACTGCG AAAGCACTTA ACAGACCTAA TATTCTAATG
GATATAATAA AGGTACTTAA TGACTTTAAG ATGGATCTGA TAAATGTAAA TACCACTGTA
ACAAAGGAAA ACGGAATAGA ATATTCACTT ATGAAATTTG ATATTATGAT AAAAAAACGT
GATGACTTTG ACAGACTGGC AAATAATCTG AAGTCAATGA AAGACATCGT TGATATAATA
AGATAA
 
Protein sequence
MRIIKERFAE LEKKIKENNL DVDVDKIENA FVLAYESHVG QKRKSGEDYI LHPIEVAEIL 
VDLRLDTDTI VAGILHDVVE DTLITIPDIE YNFGKEVARL VDGVTKLRNL PRTDSSKRIE
NIRKMVVAMS EDIRVVLIKL ADRLHNMRTL KYMKPEKQIE KAKESLEIYA PIAHRIGMAK
IKWELEDISF RYLYPEKYKE ISTLVKTKRK EREKYTNEVI EKISGELKKF NIQGEVTGRP
KHLYSIYKKM VEKQKNFNDL HDLIAIRILV NKEVECYNVL GIIHSLYIPV AGRFKDYIAV
PKSNGYQSIH TTIEGPDKQN IEVQIRTYAM HMIAEEGVAA HWKYKEKKSK SKDENYYAAV
KKMIAGNENV DSFVKEVTDN VLNETIFVFT PKGDVIELQN AATPLDFAFH IHTQIGYKTV
GAKVNDKIVP LDYELKNGDK IEILTSKNSK GPGKDWINMV KANSSKVKIR KWFKDKEFEE
RTKDGELLLE RELEKINLKF KDIEEDEKLF LYMKKYNIND TKSLFYKFAT GELSLEGFTN
RFEVKKELDE KQVLEEETLK GNKRKEKSTG GIRISGTDNT MYKFAKCCTP LPGDDIQGFV
TKVRGIVIHR KDCKNLHNLL KNDPDRAIDV EWDVEEIGKS TSKYEFVFTA KALNRPNILM
DIIKVLNDFK MDLINVNTTV TKENGIEYSL MKFDIMIKKR DDFDRLANNL KSMKDIVDII
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