Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1117 |
Symbol | |
ID | 8596596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1223412 |
End bp | 1224515 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_003307916 |
Protein GI | 269119739 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.417968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAGAA ATTTAGAAAT AAAGGGAGTG AAAAAGACTT TTGGAAAAGA TGAAATTCTG AAAGGCGTAA ACTTAAATAT AAAAAAAGGC GAATTTTTCT CTATATTAGG ACCGTCAGGA TGCGGAAAAA CCACAATTCT GAGAATGATT GCCGGTTTTA TAAAGCCTGA TGAGGGAGAA ATTCTTTTAA ATAATGAAAG AATAGATAAG ATAGATCCGA ATAAAAGAAA TGTCAATACG GTATTTCAAA ATTACGCATT GTTTCCTCAT ATGACAGTGT TTGATAATGT GGCATTTCCT CTGAAGATAA AAAAAGTTTC AAAAGACGAA ATAGAAAAAG AAGTCTTGAA ATATTTGAAG CTTGTTCATC TTGAAGAATA TAAAGATAAA TTTCCAAAGA GTCTGTCAGG CGGGCAAAAG CAGAGAGTGG CAATAGCAAG AGCACTTATC GGCAAGCCTG ATATTTTGCT TTTGGATGAG CCTTTATCTG CATTGGATGC TAAACTCAGA CAGAAACTTC TGATAGAACT GGATACTATC CATGATGAAG TAGGGATTAC TTTTATCTTC GTAACTCATG ACCAGACAGA AGCACTCAGT GTTTCTGATA GAATTGCAAT TATGAATAAA GGTGAAATAC TTCAGATAGG AACGCCGAAT GAAATATATG AATCTCCTGA AAATGCTTTT GTGGCGGATT TCATAGGAGA GACTAATTTT CTCAGCGGTA AGGTAACAGA GGTACATGAA AAACACGGCT ATATAGAAAC ACCAATTCTA GGCAGAATGA AAATAGAGCT AGACAAACCA GTAAAAGTAG GAGACACCGT AGTATTAACA TTAAGACCAG AAAAAATAAA GATTTCGAAT AACAGACCAA ATTTTTTACA TGATAATTAT AATATCCTTC ACGGAATGAT AGAAGAAGTC ATTTATACAG GATTTCAGAG TAAGCTTTTT GTAAAGGTGG AGAACAGTGA AAACCTTATA AAAGTATTTA ATCCGCATGT GGAATATCTG GTAGAGGAAG AGATTTACGA GTGGAAAGAG GAAGTTTATA TTTTTTGGAA TTATGAAGAT GCCTATTTAG TGGAGGTGAA ATAG
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Protein sequence | MERNLEIKGV KKTFGKDEIL KGVNLNIKKG EFFSILGPSG CGKTTILRMI AGFIKPDEGE ILLNNERIDK IDPNKRNVNT VFQNYALFPH MTVFDNVAFP LKIKKVSKDE IEKEVLKYLK LVHLEEYKDK FPKSLSGGQK QRVAIARALI GKPDILLLDE PLSALDAKLR QKLLIELDTI HDEVGITFIF VTHDQTEALS VSDRIAIMNK GEILQIGTPN EIYESPENAF VADFIGETNF LSGKVTEVHE KHGYIETPIL GRMKIELDKP VKVGDTVVLT LRPEKIKISN NRPNFLHDNY NILHGMIEEV IYTGFQSKLF VKVENSENLI KVFNPHVEYL VEEEIYEWKE EVYIFWNYED AYLVEVK
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