Gene Sterm_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1090 
Symbol 
ID8596569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1192154 
End bp1194049 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content36% 
IMG OID 
Productoligoendopeptidase F 
Protein accessionYP_003307889 
Protein GI269119712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0919891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA GGCATTACAG CGTACTAATT TTACTTGTAT TTTTAATATT TGGAGAGGAG 
ATATCAATGG CAAAAGCATA CGAGTCAAGA GATGAAATAG CACAGGAATA TAAATGGAAC
CTGTCAGATA TCTATAAAAA CTGGGGTTTA TGGAAAGAAG ACTACACAAA GGCAGAGAGC
ATGCTGAAGG AACTCACAGA ATATAAAGGA AAGCTTGAGG ATAAGGATAA ATTTCTGGAA
TTCCTTACAA AACAGGAAGA ACTGGATAAA TTATCATATA AACTGTACAG ATATCCGCAG
TTATTGAGAG ATGTCAATGC ATATGACAAA GATGCCACGG AAAATCTTCA GAAGGTTCAG
TTTCTGTTTT CAAAGGTAAC CACTGATCTG TCGTGGGTTA ATTCAGAAAC TATTTCAATA
GGGGAAGAAA AAGTATTGGG CTGGACAAAA GAGGAAGCAT TCTCAGATTA CAAATTTGGT
CTGGAAAATT TATTCAGACT TGAAAAGCAT ATACTTCCTG AGAATGAAAA CAGACTTTTA
TCATATTATT CACAGTTTAT GTCAGCTCCA AGAACTATTT ACAGTGAACT GTCAGTATCA
GATGTAAAAT GGCCTGTGGT GGAATTATCT ACAGGGGAAA AAGTGGAAGC AACATACGGG
AACTACAGCA AGGTATTAAG TCAGAACAAA AATCAGGAAG ACAGAAAAAA GATATTTGAC
GCTCATTACG GTACATTTAA GGAGAAGGAA AATACATACG CAGCAATTTA TAATTCAATA
CTTCAGAAAG ATATAGCAAG AAAAAATGCA TATAATTATG ATTCTTTTCT GGACAGCTTT
CTTGAAGGAG ACAATATACC AAAAGAGGTT TATCTTAACC TTATAAAAAC AGCTAAAGAA
GAATCGGCCC CTCTTAAAAG ATACTCAAAA TTAAGAAAAA AACTGCTGAA TCTGAAAGAA
TATCATACTT ATGACGGAAG TGTCAACTTA ATAGATTTTA ATAAGGAATA TGACTATAAA
ACAGCAAAAG ATCTTGTGAT AAAATCGGTA GCTCCGCTGG GAGACGTATA CCAGAGTAAA
TTAGAGGAGG CAGTAGGTCA CGGCTGGCTT GATGTTTTTG AAACAAAAGG AAAAAGATCA
GGAGCTTATT CGGCAGGTGT ATACGGTGTT CATCCTTATA TGCTTCTGAA TTATAATGAA
ACACTCGACA GTGTATTTAC ACTGGGTCAT GAGCTTGGGC ATACGCTTCA TACGCTTTAT
TCAAGTGAAA ACCAGCCTTT TGCGACACAT GATTATACGA TTTTCGTAGC AGAAGTAGCA
TCTACATTTA ATGAACGTCT TCTTCTGGAT TCAATGCTGA AAGATACAAA GGATCCTAAA
GAAAGAATAG CTCTTCTGGA ACAGGCAATA AAAAATATAA CAGGAACTTT TTATTTCCAG
GCTTTACTGG CTGATTATGA ATATCAGGCT CATAAGCTGG TAGATGAAGG GAAACCTGTA
ACACCGGAAG TATTAAACGG AATTATGAAA CAGCTGTTCA AAGATTATTA TGGAAATGAA
ATGGCAGAAG ACGAGCTTTT ATATTCAGTA TGGGCAAGAA TACCCCATTT TTATAATTCG
CCGTTTTATG TATATCAATA TGCTACATGC TTTGCATCTT CGGCAATTCT CTATGATAAG
GTGATAAATG AAAAGAATCC TGAGAAAAGA GAAGAAGCCA GACAAAAATA TATGGAGCTC
CTGAGTTCGG GCGGAAATGA CTTCCCGATG GAGCAGCTGA AAAAAGCAGG AGTGGATCTT
GAAAAGAAAG AAACAATAAA GGCGGTAAGC AAACAGCTTA ATGTTCTGCT GGATAAACTA
GAAATAGAGA TAAAAAACCT TGAAAAGTCT AATTGA
 
Protein sequence
MNKRHYSVLI LLVFLIFGEE ISMAKAYESR DEIAQEYKWN LSDIYKNWGL WKEDYTKAES 
MLKELTEYKG KLEDKDKFLE FLTKQEELDK LSYKLYRYPQ LLRDVNAYDK DATENLQKVQ
FLFSKVTTDL SWVNSETISI GEEKVLGWTK EEAFSDYKFG LENLFRLEKH ILPENENRLL
SYYSQFMSAP RTIYSELSVS DVKWPVVELS TGEKVEATYG NYSKVLSQNK NQEDRKKIFD
AHYGTFKEKE NTYAAIYNSI LQKDIARKNA YNYDSFLDSF LEGDNIPKEV YLNLIKTAKE
ESAPLKRYSK LRKKLLNLKE YHTYDGSVNL IDFNKEYDYK TAKDLVIKSV APLGDVYQSK
LEEAVGHGWL DVFETKGKRS GAYSAGVYGV HPYMLLNYNE TLDSVFTLGH ELGHTLHTLY
SSENQPFATH DYTIFVAEVA STFNERLLLD SMLKDTKDPK ERIALLEQAI KNITGTFYFQ
ALLADYEYQA HKLVDEGKPV TPEVLNGIMK QLFKDYYGNE MAEDELLYSV WARIPHFYNS
PFYVYQYATC FASSAILYDK VINEKNPEKR EEARQKYMEL LSSGGNDFPM EQLKKAGVDL
EKKETIKAVS KQLNVLLDKL EIEIKNLEKS N