Gene Sterm_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1072 
Symbol 
ID8596551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1171577 
End bp1173055 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content41% 
IMG OID 
ProductPTS system, glucose-specific IIBC subunit 
Protein accessionYP_003307871 
Protein GI269119694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.182374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TCACTGAGTT ACAAAAAATA GGAAAGGCAC TTTTAACACC AGTGGCAGTA 
CTTCCTGCAG CAGGACTTCT GCTGGCTCTT GGAAATAAAT TAGGGATTCC GTTGATGGAA
CAGACAGGAG GTATTATATT CAGTAATCTG CCGCTGTTAT TCTGTGTGGG AGTAGCTGTA
GGACTAACTA ATGATGGTAT TGCTGGTTTG GCGTCGATAG TAGCGTTTTT GGTTATGAAT
ACAGTAATGG GGATAACAGC AGGTGTTACA CCTGAAATGA TAGGGAAGAA CCCCGCATAT
GCATCGATAA TGGGAATACC TACATTGCAG ACAGGAGTTT TCGGAGGCTT GGTTGCAGGA
GTAATAGCGG CCATAATGTT TAAGAAATTT TATAATATTG AATTGCCGGC TTATCTCGGG
TTTTTTGCAG GAAAAAGATT TGTACCGATA ATAACAGCGG CAGTAGCATT TATAATAGGT
CTGTGTATGC CGTTTCTATG GAAGCCTGTT CAGGCGGGGG TAGCTGCATT ATCTTATTAT
GCAAATGAAT CAAATACTAA TATATCTACT TTCCTTTTCG GACTGGTGGA AAGAGCTCTT
GTACCTTTCG GACTTCACCA TATATTTTAT CCGCCGTTCT GGTGGCAGTT TGGAGAATAT
ACTACTAAAT CGGGACAGAT AGTAACGGGA GATCAGACTA TATGGTTTGC GATGCTGAAA
GACGGAGTAA AATCATTTGA TTCGGCTACT TATCAGGGAG CAGGGAAATT CATGGCAGGA
AAGTTTCCCT TTATGATGTT TGGACTTCCG GCAGCAGCAC TGGCAATGTA TCACGAGGCA
AAACCGGAAA GAAAAAAAAT AGTGGGCGGA ATACTTTTTT CTGCGGCGCT GACATCATTT
CTTACAGGAA TAACAGAACC GATTGAATTT GCATTTTTAT TTGTGGCTCC GGTATTATTT
ATGGTTCACT CGGTATTTGC AGGATTATCA TTTATGATAA TGAATATTCT AAAAGTAAGG
GTAGAATCTA CTTTCTCAGG CGGGCTTATA GATTTTATAG GATTCGGGGT TCTGCCGTCT
ACTCAGGGCT TCCAGACAAG ATGGATATTG GCAATTATAG TAGGACTGGT ATTTGCAGTG
GTATATTATG CTGTATTTAG AGCTTCTATC AGATTGTTTA ATCTGGCAAC ACCGGGAAGA
GAAGCTGAAG TGGAAGTGGA AGGCGAAGAG GGTGAGATAT TCGCAGGAGG ACTTGCAGAT
TCTGTTTTGC AGGCATTAGG AGGAAAAGAT AATATAGTTT CTGTGGATTC ATGTATAACC
AGACTGAGAG TGGAAGTGGT GAATGTCGAA AAAGTAGATG ATAATGTACT GAAAAGACTC
GGGGCAGCAG GAGTATTAAA AGTAGGAAAG AACGGAGTAC AGGCAGTTTT CGGCTCAAAA
GCACAGTTTA TATGTAATGA TATAAATCAG TTAATATAA
 
Protein sequence
MKLFTELQKI GKALLTPVAV LPAAGLLLAL GNKLGIPLME QTGGIIFSNL PLLFCVGVAV 
GLTNDGIAGL ASIVAFLVMN TVMGITAGVT PEMIGKNPAY ASIMGIPTLQ TGVFGGLVAG
VIAAIMFKKF YNIELPAYLG FFAGKRFVPI ITAAVAFIIG LCMPFLWKPV QAGVAALSYY
ANESNTNIST FLFGLVERAL VPFGLHHIFY PPFWWQFGEY TTKSGQIVTG DQTIWFAMLK
DGVKSFDSAT YQGAGKFMAG KFPFMMFGLP AAALAMYHEA KPERKKIVGG ILFSAALTSF
LTGITEPIEF AFLFVAPVLF MVHSVFAGLS FMIMNILKVR VESTFSGGLI DFIGFGVLPS
TQGFQTRWIL AIIVGLVFAV VYYAVFRASI RLFNLATPGR EAEVEVEGEE GEIFAGGLAD
SVLQALGGKD NIVSVDSCIT RLRVEVVNVE KVDDNVLKRL GAAGVLKVGK NGVQAVFGSK
AQFICNDINQ LI