Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0669 |
Symbol | |
ID | 8596152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 720391 |
End bp | 721170 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_003307472 |
Protein GI | 269119295 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0399726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGGT TAACAGGATT TTCAATGGAC TTTTTCTCAT TGAAAGGAAA AACGGTTTTT ATTACAGGTG CCAATACAGG ACTGGGACAG GGATATGCAA TAGCGCTTGC CACAGCAGGA GCTGATTTGT TTATAGTGAC TTATGACAGA GAATGGGAGG AAACAGAAAA GCTGATCACA GCTGAAGGAG TAAAAGTAAA GTTTTTTCAG GCAGATCTGA CTAAAAGAGA TCAAGTAACA GCAGCAGTAA ATGCATGTAT TGAAGAATAC GGTAAAATAG ATGTTCTGGT AAACAATGCG GGAACTATAA GAAGAGCTCC TCTTCTGGAG TATAAGGATG AAGACTGGCA GGCTGTCATG GACATTAATC TGAATGCCGT GTATTATCTG AGTCAGGATG TAGCAAAGCA AATGGCAAAG CAAGGCGGAG GAAAAATTAT AAACGTTGCT TCCATGCTTT CATTTCAGGG AGGAAAATTC GTACCTCCGT ATACAGCAAG CAAACATGGT GTAGCAGGCT TAACAAAAGC TTTTGCCAAT GAACTTGCAG AGAAAAATAT ACAGGTAAAT GCAATAGCAC CGGGATATAT AGAAACTGCG AATACTGCGC CAATAAGAGC AGATGAAAGC AGAAATAAAG AGATTCTGGG AAGAATACCG GCGGGCAAAT GGGGAAAACC GTTTGACTTA ATGGGCAGCA TTGTATTTTT AGCAAGCAAG GCTTCTGACT ATGTAACAGG ACATATTTTG GCTGTTGACG GCGGATGGCT TGTAAGATAG
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Protein sequence | MSGLTGFSMD FFSLKGKTVF ITGANTGLGQ GYAIALATAG ADLFIVTYDR EWEETEKLIT AEGVKVKFFQ ADLTKRDQVT AAVNACIEEY GKIDVLVNNA GTIRRAPLLE YKDEDWQAVM DINLNAVYYL SQDVAKQMAK QGGGKIINVA SMLSFQGGKF VPPYTASKHG VAGLTKAFAN ELAEKNIQVN AIAPGYIETA NTAPIRADES RNKEILGRIP AGKWGKPFDL MGSIVFLASK ASDYVTGHIL AVDGGWLVR
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