Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0548 |
Symbol | |
ID | 8596032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 595588 |
End bp | 596967 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | MATE efflux family protein |
Protein accession | YP_003307352 |
Protein GI | 269119175 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000824418 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTTA CAAAAATAAA AAACGGAAGT ATGTCGAAGG AATTTATAAA GTTTGTTATT CCGGCAATTA TCAGCATGGT CGTAACTTCG ATGTATAGTA TTATCGACGG TATTTTCGTG GGACGGGGAG TAGGTGAAAA TGCTCTTGCT GCTGTAAATA TTGCCTATCC TCTGATCATG CTTCATATTG CACTTGCTAT GCTTGTGGCA ATAGGCGGTG CCAATGCATT TTCCATTAAT AAAGGCAGGG GAGATATAAA AAATGCCAAC AGAATATTTT TGCAGAGTAT GATTCTGATA GTCGGAATCA GTGTTATCCT TAATGTTTTG ATACTGGTAT TTCCAACACA GGTCAGCAGA CTTCTGGGGG CAGATGACAT GCTGCTTCCT TATGTGCGTG ATTATATAAA ATGGGTAGCG TTATTTGCAG TTATTTATAT GCCCGGACTT GCACTCAGCA TTTTTATCCG GAACGATGAT GCTCCAAAGC GTGAGATGAC AGGAACTTTA ATCGGAGCAG TAACCAATAT AGTACTTGAC TATTTGTTTA TCATGGTATT TGATATGGGT GTTTCCGGAG CTGCGATTGC TACAGGAATA GGGCAGTTGG TTTCGACATT TATTTTTATG ACACATTTTA CAAAGAAAAA CCGGTTATTG AAAATAGAAA AAGTAAAATT CTACATTGAT GATATAAAAT ATATATTTAT AAATGGAAGT CCGTCATTTT TGATGGAATT CAGCCAGGCA GCAGTAGCTT TCAGTTTTAA TATTGTTCTG CTGTCACGTA TCGGAGCTCT GGGAGTATCA GCTTACAGCA TTGTTATGTA TATATGTTCA ATATTTAATA TGATACTTAT TGGTCTTGTG CAGGGAATAC AGCCGATTAT GAGCTTTAAT TACGGGAAGG GCAACAGAGA AAATATCCAA AAAGTTTATA AAATGGCGGT AAGGACATCA TTATGCCTGA CGGTTATCGT ATATATAGCA GTATTTATTT TCGGAAAAGC ATTATCAGAT ATTTTTATAC GAAATAATAC GCAGGTTACA AATATGGCCT TGAATATGAT GAGATACTAT TTTCTGGCCT TTTTCCCAAT TGGTATTTCG CTGATTAATA TTTTATATTT TCAAATAATA AGACATGAAA AATGGGCTGT TTTTCTTTCA TTTATAAGGT GTATAGGCTT CGTTCAGCTG TCGCTTCTTA TAATGCCGGA ATTGTTTGGA ATTACAGGTA TATTTCTTTC GTTTTTATGC GGCGAGCTTG CCAATTGTTT TATTTCCGTC ATACTTTATA AATATGCAGA GAAAAGTCAG AGTAATACAG TAAAAATTTC AGATAAAAAA GTTTTATTCA GAAATATTGA AACAGATTAG
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Protein sequence | MTVTKIKNGS MSKEFIKFVI PAIISMVVTS MYSIIDGIFV GRGVGENALA AVNIAYPLIM LHIALAMLVA IGGANAFSIN KGRGDIKNAN RIFLQSMILI VGISVILNVL ILVFPTQVSR LLGADDMLLP YVRDYIKWVA LFAVIYMPGL ALSIFIRNDD APKREMTGTL IGAVTNIVLD YLFIMVFDMG VSGAAIATGI GQLVSTFIFM THFTKKNRLL KIEKVKFYID DIKYIFINGS PSFLMEFSQA AVAFSFNIVL LSRIGALGVS AYSIVMYICS IFNMILIGLV QGIQPIMSFN YGKGNRENIQ KVYKMAVRTS LCLTVIVYIA VFIFGKALSD IFIRNNTQVT NMALNMMRYY FLAFFPIGIS LINILYFQII RHEKWAVFLS FIRCIGFVQL SLLIMPELFG ITGIFLSFLC GELANCFISV ILYKYAEKSQ SNTVKISDKK VLFRNIETD
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