Gene Sterm_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0548 
Symbol 
ID8596032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp595588 
End bp596967 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content35% 
IMG OID 
ProductMATE efflux family protein 
Protein accessionYP_003307352 
Protein GI269119175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000824418 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTA CAAAAATAAA AAACGGAAGT ATGTCGAAGG AATTTATAAA GTTTGTTATT 
CCGGCAATTA TCAGCATGGT CGTAACTTCG ATGTATAGTA TTATCGACGG TATTTTCGTG
GGACGGGGAG TAGGTGAAAA TGCTCTTGCT GCTGTAAATA TTGCCTATCC TCTGATCATG
CTTCATATTG CACTTGCTAT GCTTGTGGCA ATAGGCGGTG CCAATGCATT TTCCATTAAT
AAAGGCAGGG GAGATATAAA AAATGCCAAC AGAATATTTT TGCAGAGTAT GATTCTGATA
GTCGGAATCA GTGTTATCCT TAATGTTTTG ATACTGGTAT TTCCAACACA GGTCAGCAGA
CTTCTGGGGG CAGATGACAT GCTGCTTCCT TATGTGCGTG ATTATATAAA ATGGGTAGCG
TTATTTGCAG TTATTTATAT GCCCGGACTT GCACTCAGCA TTTTTATCCG GAACGATGAT
GCTCCAAAGC GTGAGATGAC AGGAACTTTA ATCGGAGCAG TAACCAATAT AGTACTTGAC
TATTTGTTTA TCATGGTATT TGATATGGGT GTTTCCGGAG CTGCGATTGC TACAGGAATA
GGGCAGTTGG TTTCGACATT TATTTTTATG ACACATTTTA CAAAGAAAAA CCGGTTATTG
AAAATAGAAA AAGTAAAATT CTACATTGAT GATATAAAAT ATATATTTAT AAATGGAAGT
CCGTCATTTT TGATGGAATT CAGCCAGGCA GCAGTAGCTT TCAGTTTTAA TATTGTTCTG
CTGTCACGTA TCGGAGCTCT GGGAGTATCA GCTTACAGCA TTGTTATGTA TATATGTTCA
ATATTTAATA TGATACTTAT TGGTCTTGTG CAGGGAATAC AGCCGATTAT GAGCTTTAAT
TACGGGAAGG GCAACAGAGA AAATATCCAA AAAGTTTATA AAATGGCGGT AAGGACATCA
TTATGCCTGA CGGTTATCGT ATATATAGCA GTATTTATTT TCGGAAAAGC ATTATCAGAT
ATTTTTATAC GAAATAATAC GCAGGTTACA AATATGGCCT TGAATATGAT GAGATACTAT
TTTCTGGCCT TTTTCCCAAT TGGTATTTCG CTGATTAATA TTTTATATTT TCAAATAATA
AGACATGAAA AATGGGCTGT TTTTCTTTCA TTTATAAGGT GTATAGGCTT CGTTCAGCTG
TCGCTTCTTA TAATGCCGGA ATTGTTTGGA ATTACAGGTA TATTTCTTTC GTTTTTATGC
GGCGAGCTTG CCAATTGTTT TATTTCCGTC ATACTTTATA AATATGCAGA GAAAAGTCAG
AGTAATACAG TAAAAATTTC AGATAAAAAA GTTTTATTCA GAAATATTGA AACAGATTAG
 
Protein sequence
MTVTKIKNGS MSKEFIKFVI PAIISMVVTS MYSIIDGIFV GRGVGENALA AVNIAYPLIM 
LHIALAMLVA IGGANAFSIN KGRGDIKNAN RIFLQSMILI VGISVILNVL ILVFPTQVSR
LLGADDMLLP YVRDYIKWVA LFAVIYMPGL ALSIFIRNDD APKREMTGTL IGAVTNIVLD
YLFIMVFDMG VSGAAIATGI GQLVSTFIFM THFTKKNRLL KIEKVKFYID DIKYIFINGS
PSFLMEFSQA AVAFSFNIVL LSRIGALGVS AYSIVMYICS IFNMILIGLV QGIQPIMSFN
YGKGNRENIQ KVYKMAVRTS LCLTVIVYIA VFIFGKALSD IFIRNNTQVT NMALNMMRYY
FLAFFPIGIS LINILYFQII RHEKWAVFLS FIRCIGFVQL SLLIMPELFG ITGIFLSFLC
GELANCFISV ILYKYAEKSQ SNTVKISDKK VLFRNIETD