Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0488 |
Symbol | |
ID | 8595974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 540766 |
End bp | 541527 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003307294 |
Protein GI | 269119117 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.192995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATAA AAGAAAAAAC TGCTATAATA ACAGGCGGAA GTCGCGGTCT TGGCCGGAAT ACAGCCCTTA ATCTTGCAAG TCGGGGAGTA AATATTATTT TTACTTATAA CTCTAATAAA TTTGAAGCAG AAAAGACTCT CCAACTTATT CAAGAGTATG GAGTAAATGG AGCTATGTTA AATCTTGATA CAGCTAATAC TAAATTATTT GATGCTTTTG TACAAAATGT TGAGAAAATT TTACAGGAAT GGAAGTGTAA AACATTTAAT TACCTGATTA ACAACGCTGG AACATCACAT CACAATTCAA TTGAAAATAC TACAGAAGAA GAATTAGACA CTCTTTATAA TGTCCATTTT AAGGGAGTGT TCTTTCTTAC GCAAAAACTC CTTATGCTTC TTAATGACGG AGGGAGTATA ATTAATATTT CCACAGGTCT AACACGATTT ACTTCACCTG GAAGCGCAGC TTATGCGTCT ATAAAAGGTG CCGTTGAAGT GATGACACGT TATTTGGCAA TGGAATTAGG ACCACGTAAA ATCACCGTAA ATACTATTGC TCCCGGAGCC ATTCAAACAG ATTTCAGTGG GGGTGTAGTC CGTGATAATC CTGAAGTAAA TAAAATGATA GCTGAGCATA CAGCACTGGG TCGTGCTGGT GTTCCGGATG ATATCGGACC TATGATTGCT TCACTATTAT CAGATAGTAA TAGATGGGTA ACCGGTCAGC GTATTGAAGT TTCCGGAGGA ATGTTTCTTT AA
|
Protein sequence | MDIKEKTAII TGGSRGLGRN TALNLASRGV NIIFTYNSNK FEAEKTLQLI QEYGVNGAML NLDTANTKLF DAFVQNVEKI LQEWKCKTFN YLINNAGTSH HNSIENTTEE ELDTLYNVHF KGVFFLTQKL LMLLNDGGSI INISTGLTRF TSPGSAAYAS IKGAVEVMTR YLAMELGPRK ITVNTIAPGA IQTDFSGGVV RDNPEVNKMI AEHTALGRAG VPDDIGPMIA SLLSDSNRWV TGQRIEVSGG MFL
|
| |