Gene Sterm_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0183 
Symbol 
ID8595679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp195744 
End bp196490 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content36% 
IMG OID 
Producthemolysin A 
Protein accessionYP_003306999 
Protein GI269118822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA GATTAGATGT GTTTCTCGTG GAGGAAGGCT ATTTTGACAG CAGGGAAAAG 
GCAAAAAGGG AAATAATGCT CGGAAATGTA ATTATAAACG AGCAGGCCGT CACTAAAGCG 
GGGACAATGA TTAAAGATAA TCAGGAGCTG AATATAAGAA TCAAGGAAAA GCTGAAATAT 
GTAAGCAGAG GCGGTTTGAA GCTGGAAAGA GCACTGGAAT ACTGGAATCT TGATTTTAAT 
AATAAAAAAA TTCTGGATAT AGGAGCTTCG ACAGGCGGTT TTACAGACTG TGCCCTGCAA 
AACGGTGCAG ATTTTGTATT TGGAGTGGAT GTCGGGAAAA ATCAGCTTGA CTGGAAGCTG 
CGAAATGATA AAAGAGTAAA GTCTCTTGAG GAAATGCATA TAAAAAATCT TTCTCCTGAT 
GATATTAATA ATGAAAAAAC AGATTATATC GTGATAGATG TTTCATTTAT ATCACTTACA 
TCTGTTTTTA GATATTTTAA ACAATTCCTG AAAGAGGATG GAAAAGTCAT AGCATTGATA 
AAGCCTCAGT TTGAAGTGGG AAAAGATAAA ATAGGGAAAA ACGGGATAGT TAAAGAAGAA 
GAATACCGCA GTGAAGCAAT AAAAAGTGTG GTAAAGGAAG CTTCGGAATG CGGATTTAAA 
ATAATAGAGG TAATAGAGTC TCCGATTACC GGAACAAAAG GAAATATAGA ATATCTGTCT 
TTATTTGAGA TGATAGCTTC ATCATGA
 
Protein sequence
MKRRLDVFLV EEGYFDSREK AKREIMLGNV IINEQAVTKA GTMIKDNQEL NIRIKEKLKY 
VSRGGLKLER ALEYWNLDFN NKKILDIGAS TGGFTDCALQ NGADFVFGVD VGKNQLDWKL 
RNDKRVKSLE EMHIKNLSPD DINNEKTDYI VIDVSFISLT SVFRYFKQFL KEDGKVIALI 
KPQFEVGKDK IGKNGIVKEE EYRSEAIKSV VKEASECGFK IIEVIESPIT GTKGNIEYLS 
LFEMIASS