Gene Sterm_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0105 
Symbol 
ID8595601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp112054 
End bp113760 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content40% 
IMG OID 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_003306921 
Protein GI269118744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.180923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA AGATGATAAG CGGGGCCAGA ATAATACTGG AATGCCTCAG CAGACTAGGA 
GTAAAAAATA TATTTGGATA TCCCGGCGGA AGCGTGATTC CTATTTATGA TGAATTATAC
AGTTTTAAGG GTCTTAATCA TTATTTTTCA AGACATGAAC AGGGAGCGGC ACATGAAGCT
GACGGGTATG CAAGGGTTTC TGGAGAAGTA GGTGTGTGTC TTGCCACTTC AGGACCGGGA
GCTACCAATT TGGTAACAGG AATAATGACT GCACATATGG ACTCTATACC TCTTCTCGCC
ATTACAGGAC AGGTAGTAAG CAACCTTTTG GGAAAAGATG CATTTCAGGA AAGTGACATA
GTGGGGATAA CAGTACCTAT TACAAAAAAC AATTATCTGG TTCAGAATAT AAAGGATCTG
CCGCATATGA TGAAGGAGGC CCATTATATA GCAAGAACCG GAAGACCGGG ACCTGTACTC
ATAGATGTGC CCAAAGATAT ACAGCTGGCA AAGATTCCTT TTGCAGAATT TGAAAAACTG
TATAATCAGG AAATAGAGCT GGAAGGATAT GAACCTACAT ATCACGGGCA TCCTATGCAG
ATCAAAAAAG CCGTAAAAGA AATACAAAAT GCAAAAAAGC CGTTAATTAT AGCAGGAGCC
GGAATATTAA GGGCAAATGC AAGTGATGAG CTGAAAGAAC TGGCTGAAAA AATGGATATA
CCTGTGACTA TGACTCTTCT GGGTCTCGGA GCTTTTCCTT CAAGCAATGA ATTATCGCTG
GGAATGCTCG GGATGCACGG AACAGTTTAT GCAAACTACG CTACTGCAGA AGCTGATCTG
ATAATAGCGG CAGGAATCAG ATTTGACGAT AGAATTACAG GAAATCCTGA TAAATTTTGT
AAAAATGCAA AAATAATACA TATTGATATA GATCCTGCGG AGATAGGAAA GAATAAAAAG
CCGGATATAC CAATAGTAGG AGATTTGAAA AATATACTGA CGGAAATAAA CGGAAAGCTG
AAAGATAAAA ATAACAAGGA ATGGCATGAA AAAATAAAGG AATGGAAAGA AGAATACCCG
CTGATTTACA AAAAACAGGA TGAATCAAAG CTGTGTCCTC AGGAGGTTCT GGAAAAGATA
AACAGCATAG TAAAAGGAGA AGCAATAATA GTAACCGATG TAGGTCAGCA TCAGATGTGG
GCGGCACAGT ATCTCGACTA TGAAAAGCCG AACACAATAT GTACTTCCGG GGGAGCCGGA
ACAATGGGAT TCGGACTGCC GGCAGCAATC GGGGCACAGG TGGCAAAGCC GAAAGAGAAA
GTAATAACAA TAGTAGGCGA CGGCGGAGTA CAGATGAATA TTCAGGAGCT GATGGTAGTA
AAGCAGTATA ACCTTCCTGT CAAAATAGTA ATTTTGAATA ACTCTTATCT GGGAATGGTA
AGACAGTGGC AGGAAATGTT TAATGAAAAA AGATACTCTT TTGTAGATCT TGAACATAAC
CCTGATTTTG TAAAGCTGGG TGAAGCCTAT GGAATAAAAT CAGTAGAGCT GTCAAAGCCG
GAAGATCTTG TTCAGATGGA AGAGCTTTTG AATACAGACG GGCCTGTTCT GATAAACTGT
ATAGTTGAAA AAGAAGAGAA TGTCTTTCCG ATGATCCCCT CAGGAACAAG TGTTGATCAG
ATGGTAGGGA AAAAGGGGGA GATTTAG
 
Protein sequence
MEDKMISGAR IILECLSRLG VKNIFGYPGG SVIPIYDELY SFKGLNHYFS RHEQGAAHEA 
DGYARVSGEV GVCLATSGPG ATNLVTGIMT AHMDSIPLLA ITGQVVSNLL GKDAFQESDI
VGITVPITKN NYLVQNIKDL PHMMKEAHYI ARTGRPGPVL IDVPKDIQLA KIPFAEFEKL
YNQEIELEGY EPTYHGHPMQ IKKAVKEIQN AKKPLIIAGA GILRANASDE LKELAEKMDI
PVTMTLLGLG AFPSSNELSL GMLGMHGTVY ANYATAEADL IIAAGIRFDD RITGNPDKFC
KNAKIIHIDI DPAEIGKNKK PDIPIVGDLK NILTEINGKL KDKNNKEWHE KIKEWKEEYP
LIYKKQDESK LCPQEVLEKI NSIVKGEAII VTDVGQHQMW AAQYLDYEKP NTICTSGGAG
TMGFGLPAAI GAQVAKPKEK VITIVGDGGV QMNIQELMVV KQYNLPVKIV ILNNSYLGMV
RQWQEMFNEK RYSFVDLEHN PDFVKLGEAY GIKSVELSKP EDLVQMEELL NTDGPVLINC
IVEKEENVFP MIPSGTSVDQ MVGKKGEI