| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_0102 |
|---|
| Symbol | |
|---|
| ID | 8595598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 108462 |
|---|
| End bp | 110120 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_003306918 |
|---|
| Protein GI | 269118741 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0234635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGTG ATAATTTGAA AAAGGGAGAC AGAAGAGCAC CGCACAGATC CCTGCTTAAG
GGATTAGGTT TTGTAAATGA GGAAATGGAC AAGCCTATTA TAGGAATTGC CAATTCATTT
AATGAGATAA TACCGGGACA TGTCCATCTG CAGACTCTTG TACAGTCTGT AAAAGACGGT
ATAAGAATGG CAGGAGGAGT TCCTATGGAA TTTAATACGA TAGGAATCTG CGACGGGCTG
GCAATGAATC ACATAGGAAT GAAATATTCG CTGGTAACAA GACAGATAGT GGCTGATTCG
ATAGAAGCTA CTGCGATGGC AACACCATTT GATGCTATAG TTTTTATACC AAACTGTGAT
AAGGTAGTTC CCGGAATGCT TATGGCAGCA GCAAGACTGA ATATACCAAG TATATTTATA
AGCGGAGGAG CAATGCTCGC AGGTGTCTAT AAAGGGAAAA AAATAGGATT AAGCAATGTT
TTTGAATATG TTGGGCAGTT TGAATCAGGG AAAATGACTG CAAAAGAACT GAATATGGTA
GAAGATATGG CGTGTCCTAC ATGCGGGTCA TGTTCGGGAA TGTACACTGC AAATACAATG
AACTGTCTGA CTGAAGCTCT GGGAATGGGA CTGCCCGGGA ACGGAACTGT GCCTGCGGTA
TTTTCGGAAA GACTCAGACT TGCTAAAAAA GCAGGAATGC AGATACTGGA AATACTAAAA
GCTGATCTGA AACCAAAAGA TATAATGACA AAGGAAGCAT TTGTAAATGC AGTGGCAGTG
GATATGGCAC TCGGAGGATC TACAAATACA GCACTTCATC TGCCGGCAGT AGCACATGAT
GCAGGAGTAA AACTTACTAT AGATGATTTT AACGAAATTG CGGCGAGAGT ACCTCAGCTG
TGTAAGCTGT CACCTTCAGG AGAGTATTTC ATAGAGGATT TATACAGAGC AGGCGGAGTT
ACTGCGGTAA TGAGAAGACT GCTTGAAAAC GGAGAGCTGG ATGGAACTCA GAAAACAGTT
GCACTGAAAA CACAGGAAGA GCTGTGTAAG GAAGCATATA TAAATGACGA GGATGTAATA
AAGCCGTGGG ATAAGCCGGC GTATGCAGGC GGAGGACTGG CAGTGCTGAA AGGAAATCTT
GCCGAGCTGG GATCAGTGGT AAAAGCCGGG GCAGTGGCAG ATGAAATGCA GGTACATTCA
GGACCGGCAA AGGTGTATAA TTCTGAAGAG GAGGCCGTGG ACGGAATTCT CGGCGGAAAA
GTAAAAAGCG GAGATGTAGT GGTAATAAGA TATGAAGGAC CTAAAGGCGG ACCGGGAATG
AGAGAAATGC TTACTCCGAC ATCTGTAATA GCAGGTATGG GACTGGATAA AGAAGTAGCA
CTTCTTACTG ACGGAAGATT TTCAGGGGCG ACAAGAGGAG CTTCAATAGG GCATGTGTGT
CCTGAGGCAG CAGTAGGAGG AACTATAGCA GTAGTAAGAG ACGGGGATAT TATAGAAATA
GATATACCAA ACAGAACTCT GAATGTAAAA CTAAGCGACG AGGAAATTGC AGCCAGAAAA
GCCGAGCTGA AACCATATGA GCCTGAAGTA ACAGGATATC TGAAAAAATA TGCACTGCAT
GTAGGATCGG CAGTTAACGG AGCAATAGAA GAATATTAA
|
|---|
| Protein sequence | MRSDNLKKGD RRAPHRSLLK GLGFVNEEMD KPIIGIANSF NEIIPGHVHL QTLVQSVKDG
IRMAGGVPME FNTIGICDGL AMNHIGMKYS LVTRQIVADS IEATAMATPF DAIVFIPNCD
KVVPGMLMAA ARLNIPSIFI SGGAMLAGVY KGKKIGLSNV FEYVGQFESG KMTAKELNMV
EDMACPTCGS CSGMYTANTM NCLTEALGMG LPGNGTVPAV FSERLRLAKK AGMQILEILK
ADLKPKDIMT KEAFVNAVAV DMALGGSTNT ALHLPAVAHD AGVKLTIDDF NEIAARVPQL
CKLSPSGEYF IEDLYRAGGV TAVMRRLLEN GELDGTQKTV ALKTQEELCK EAYINDEDVI
KPWDKPAYAG GGLAVLKGNL AELGSVVKAG AVADEMQVHS GPAKVYNSEE EAVDGILGGK
VKSGDVVVIR YEGPKGGPGM REMLTPTSVI AGMGLDKEVA LLTDGRFSGA TRGASIGHVC
PEAAVGGTIA VVRDGDIIEI DIPNRTLNVK LSDEEIAARK AELKPYEPEV TGYLKKYALH
VGSAVNGAIE EY
|
|---|
| |