Gene Sterm_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0082 
Symbol 
ID8595578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp87452 
End bp88537 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content40% 
IMG OID 
ProductNAD/NADP octopine/nopaline dehydrogenase 
Protein accessionYP_003306898 
Protein GI269118721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AAAAAATCGC AATTTTAGGC GGAGGAAACG GAAGTCATAT GATGGCTGTC 
GATATGAAAG TAAAAGGACA TGAAGTTCGT ATGTATGAAA TGCCGGAATT TAAGGAGAAT
GTTACACAGT TATTTAATAC ACAGACTATA GAAGTTTCTG GTATAATGAA AGAAAAAGTC
AAAGTAGATA TGGTCACAGA TGACATCAAA AAAGCCGTAG ACGGAGCTGA CTATATTCTT
GTGGTAACCC CTGCCTTTGC CCATAAAGGC TATGCGGAAC TTTTAAAAGG AAATGTAGTC
GAGAATCAGA TTATTGTAGT TTTTCCCGGT GCATTTGCCG CATTAATATT CAAAAATATA
CTTGGCAGCG ACAGCTGTCC GGTTATTGCC GATGCCAATA ATCTGCCTTA TGATGCAAGA
CTGACTTCAC CGTGTAAAGT AACTCTTTTT GGAAGAAACA AAATAAATAT TGCATTCCTG
CCGGCTGAAA AAGGAGCAGA GCTTATTGAT ATGCTGAGGG AAGATTTGTT TCCTTTTGAA
AAAATTTACA CTGATGTTCT GGAATGCGGC TTGGGAATTG TGAATCCCGC ACTGCATTCA
GGTCCGTGCC TTTTAAATAT AAGTAATATA GAATCACCGC ATGTGGACTT CTATCTGTAT
GAGCACGGAT TTACACCTTC AGCTGCGAAA ATAGATATTG TTCTGGATAA TGAAAGAAAA
GCCGTAGGAA AACAGCTTGG TTATCACCTT ACTCCTATCG AGGATTTCAG CGGTCTAAAC
GAAGGCTACA CATGGGAAGA GCTTTACAGG GCTACACACG GAGCTATTTC ACTTACTCCT
ATTTCAGGAC CAAATGATAT AAATAACCGT TATCTTACTG AAGATGCCCC TTTCGGTCTG
GTTCCATGGA GCAGTCTGGG GAAGGCCATA GGTATTCCCA CACCTACTAT TGATGCAGTA
ATCAGTCTTT ATAATATAAT ACACGAAACC GACTGGAGAG AAAGAGGCTC TACTGTAAAG
GATCTCGGGC TTGAAGGCAT GGATCTGGAA AGCATAAAAA AATATGTAAA AACCGGAAAA
AAATAG
 
Protein sequence
MKKKKIAILG GGNGSHMMAV DMKVKGHEVR MYEMPEFKEN VTQLFNTQTI EVSGIMKEKV 
KVDMVTDDIK KAVDGADYIL VVTPAFAHKG YAELLKGNVV ENQIIVVFPG AFAALIFKNI
LGSDSCPVIA DANNLPYDAR LTSPCKVTLF GRNKINIAFL PAEKGAELID MLREDLFPFE
KIYTDVLECG LGIVNPALHS GPCLLNISNI ESPHVDFYLY EHGFTPSAAK IDIVLDNERK
AVGKQLGYHL TPIEDFSGLN EGYTWEELYR ATHGAISLTP ISGPNDINNR YLTEDAPFGL
VPWSSLGKAI GIPTPTIDAV ISLYNIIHET DWRERGSTVK DLGLEGMDLE SIKKYVKTGK
K