Gene Sterm_0052 details

Gene Information

• Locus tag: Sterm_0052
• ID: 8595551
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 58430
• End bp: 59125
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 36%
• Product: undecaprenyl diphosphate synthase
• Protein accession: YP_003306871
• Protein GI: 269118694

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000100505
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAGAA AAATACCCGA ACATATTGCA ATTATTATGG ATGGAAATGG AAGATGGGCC 
AAATCACGAG GACTTGCCAG AGTGGAAGGT CATAAAAGAG GAGCTGATAC TCTGGAGTTT 
GTTTTAAGAC AAAGTGTTTC ATTTGGTGTA AAGTATCTTA CTGTTTATGC TTTTTCCACT 
GAAAACTGGA AAAGACCCAA GACCGAGGTC TCTGCACTTA TGAATCTTTT TTCAAAATAT 
CTGGATAACA AAAAGGATGA ACTGAAAGAA CAGGATATAA GACTAGTTGT ATCCGGTACA 
GAAGAAGGTG TCAGCAAAAA ACTGTTAAAA AAAATAAAAG AAACAGAGGA TTATCTTTCT 
GACTGTAATA CCCTTACTTT TAACATTGCC TTTAACTACG GCGGCAGAAA AGAGATCACA 
GACGGTATTA ACAAGCTTTT GGCAGAAGGC AGAACTTCCA TTACCGAAGA TGAATTTCAA 
AATTATCTTT ATCAGCCTGA TATTCCCGAT CCTGAATTGG TTATCAGAAC CAGCGGGGAA 
TTCAGAATAA GCAATTTTCT TTTATGGGAA ATCGCATACT CTGAATTTTA TATTACCAAT 
ACTTACTGGC CTGATTTTGA TAAAAATGAA TATGAAAAAG CCATTGAATG GTTTAATAAT 
AGAGAAAGAC GTTTTGGAGG AGTAGATGCT AAGTAG 

 

Protein sequence

MDRKIPEHIA IIMDGNGRWA KSRGLARVEG HKRGADTLEF VLRQSVSFGV KYLTVYAFST 
ENWKRPKTEV SALMNLFSKY LDNKKDELKE QDIRLVVSGT EEGVSKKLLK KIKETEDYLS 
DCNTLTFNIA FNYGGRKEIT DGINKLLAEG RTSITEDEFQ NYLYQPDIPD PELVIRTSGE 
FRISNFLLWE IAYSEFYITN TYWPDFDKNE YEKAIEWFNN RERRFGGVDA K