Gene Sterm_0047 details

Gene Information

• Locus tag: Sterm_0047
• ID: 8595546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 53141
• End bp: 53905
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 29%
• Product: transcriptional regulator, AraC family
• Protein accession: YP_003306866
• Protein GI: 269118689

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.230347
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTATA AAGAATTTCT CCCAGGAAAA AATTTAGGAC ATATAATTGA TTCTTACTGG 
TTTTTGGACA ACTCTTCCAT ATACGGCGAA TCTCAGGTTC TTCCTGATTG CTCAATGGAT 
ATTATTTTTA ATTTTGGTAA TTGCTTTCAC TCAAAAAGTA ATTCCAAAAG TATAGTCAAT 
AATAACGACA TTATAATTAC AGGCATGATG ACGAGCTTTA AGAGTCATTC TATGGAAAAG 
GACAGCAGAC TTTTTGGTGT ACGGTTCAAG CCCCTTGGTC TTAACCGTTT TTTGAACTTT 
GGATTTCATA ATATAAAGAA TGATATTATT GATCTGAATT CAGTTATTTC TGATTCCTGT 
CATCAAAAAT TCAGAAATAT TTTTTTACTG GCAGAATATA AGGATATTAT TGGATTTTTT 
GAAAAAATTT TTATTGAACA CCTAAATTCC CGCAGTAATG ATATTGATCT GGATGTATCT 
TCTGCTCTTC AAAATATTTA TAATTCCGAA AATCCTTCTG TTAATGAATT ACACAAAATT 
ATAGGTATTT CACAAAGGTA TCTGGAAATA AAGTTTAAAA AAGAGATTGG CATTAATATG 
AAAGAATTTA TTAATATAGA AAGATTTATA AAAACTAAAA AAGAAATCCT CAGCTCGGAT 
AAAAGCCTTA CAGAAATTGC TGTAAATAAC GGTTATTATG ATTCCTCCCA TATGATAAAA 
GATTTTATAA GGTATACGGG TTCTTCTCCA AAAAACTGGA AATAG 

 

Protein sequence

MNYKEFLPGK NLGHIIDSYW FLDNSSIYGE SQVLPDCSMD IIFNFGNCFH SKSNSKSIVN 
NNDIIITGMM TSFKSHSMEK DSRLFGVRFK PLGLNRFLNF GFHNIKNDII DLNSVISDSC 
HQKFRNIFLL AEYKDIIGFF EKIFIEHLNS RSNDIDLDVS SALQNIYNSE NPSVNELHKI 
IGISQRYLEI KFKKEIGINM KEFINIERFI KTKKEILSSD KSLTEIAVNN GYYDSSHMIK 
DFIRYTGSSP KNWK