Gene Sterm_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0028 
Symbol 
ID8595527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp36386 
End bp37369 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content39% 
IMG OID 
ProductTransketolase central region 
Protein accessionYP_003306847 
Protein GI269118670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAA TAACATATGC AGAAGCAATC AGAGAAGCTA TGTCGGAAGA AATGAGAAGG 
GATGAAAATG TATATCTGTT AGGGGAAGAT GTAGGTATAT ACGGCGGAGC CTTTGGTGTA
TCTGTAGGAA TGATAGATGA ATTCGGTGAA GAGAGAGTAA GAGATACTCC GATATCTGAA
GCAGTTATTG CCGGTGCTGC TGCTGGATCG GCAGTTACAG GTATGAGACC AATAGCAGAA
CTTATGTTTA TGGACTTTTC TACTATTGCT ATGGATGCCA TTGTTAACCA GGCAGCTAAA
ATGAGATATA TGTTCGGCGG TAAAGCACAG GTTCCCTTTG TATTAAGATG TCCTGCAGGA
TCAGGTACAG GAGCTGCCGC CCAGCATTCA CAAAGTCTGG AAGCATGGTT CTGTCATATT
CCGGGACTGA AAGTTGTTGC ACCTTCTACA CCTTATGATG TAAAAGGTCT TCTAAAAAGT
TCTATCAGAG ATAATAATCC TGTTATCTTC GTGGAACAGA AGCTTCTGTA CAGAACAAAA
GGCGAAGTAC CTGAGGAAGA ATATACTATC CCTTTAGGTG TTGCTGATAT AAAAAGAACC
GGTAAAGATG TTACTGTAGT TACATATGGA AGAATGCTTC CGAGAGTTCT TGAAGCAGCA
GAAGAAGCAG CAAAAGACGG AATAGATGTA GAAGTAATTG ATCCGAGAAC ACTTGTACCT
CTTGATATAG AAACAATAAA GAATTCTGTA ATCAAAACAG GAAGACTTAT AGTAGTTAAT
GAAGCGGTAA AAAGAGGAAG CTATGCAGGG GAAATAGTAT CAGAAGTAGT GGAAAGCGAA
GCATTTGATT ATCTTGATTC AGAGATAATA AGACTTTCGG GAAAAAATAC ACCTATACCA
TATAACCCTA AGCTGGAAGC CTATGTAGTA CCAAGTAAGG AAGATATAAC AGAAGCAATA
TATAAGGCAA TGAACAGAAA ATAA
 
Protein sequence
MREITYAEAI REAMSEEMRR DENVYLLGED VGIYGGAFGV SVGMIDEFGE ERVRDTPISE 
AVIAGAAAGS AVTGMRPIAE LMFMDFSTIA MDAIVNQAAK MRYMFGGKAQ VPFVLRCPAG
SGTGAAAQHS QSLEAWFCHI PGLKVVAPST PYDVKGLLKS SIRDNNPVIF VEQKLLYRTK
GEVPEEEYTI PLGVADIKRT GKDVTVVTYG RMLPRVLEAA EEAAKDGIDV EVIDPRTLVP
LDIETIKNSV IKTGRLIVVN EAVKRGSYAG EIVSEVVESE AFDYLDSEII RLSGKNTPIP
YNPKLEAYVV PSKEDITEAI YKAMNRK