Gene Sterm_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0006 
Symbol 
ID8595505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp4237 
End bp4917 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content36% 
IMG OID 
ProductDNA topoisomerase (ATP-hydrolyzing) 
Protein accessionYP_003306825 
Protein GI269118648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000077593 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA TTTTTGATGC CAAGAGTATT GCTGTTCTTG GAATTATGGA AGGAATAAGA 
AAAAAGCCCG AGATGTTTAT CGGCTCTGTG TCAGCTGAAG GGCTCTGCAA TCTGGTATGG 
GAAATAATTG ATAACTGTGT AAACGAAGCT TTAGAGGGAT TTTGCAATAC TATAAAGGTA 
AGACTGCTTA AAAATAATAT AATAGAAGTA TCTGATAACG GAAGAGGACT GCCTGTGGAT 
TTTTACGAAA AAGCCGGTAA ATCAAAGCTT GAGGTTATCT TAACGGGAAA ATATATAAGA 
GGAGAATTAA CAGGCGGTAT TTACAAGCTT TCACGGAAAA AGTATAAGGG AGGTCTTGTT 
TCAGTTAACG GATTATCTGA AACTCTGGAG GCTGTAGTAA TAAAAGACGG CAAAGTATGG 
TATCAGAAAT ATCATAAAGG AGTGCCGTCA GGAGATATAA AAAAGACAGG GGAGAAATCT 
GAATATATTC ACGGGACTGT GATAAGATTC AGAGCTGACA GGGAAATTTT CGGGGAATTG 
GAATATGACT ATGAAATTTT GCTTGCAAAA TTAAAGGAAA TCCGGGGAAT AAAAGTAATT 
TTATGTGATG AAAGAAATGA AGCTGCCGGA AAAACAGAAA GTTTTTATTT TAACGGGGAA 
ATTAGAGAGT TTCTTAAATG A
 
Protein sequence
MSEIFDAKSI AVLGIMEGIR KKPEMFIGSV SAEGLCNLVW EIIDNCVNEA LEGFCNTIKV 
RLLKNNIIEV SDNGRGLPVD FYEKAGKSKL EVILTGKYIR GELTGGIYKL SRKKYKGGLV 
SVNGLSETLE AVVIKDGKVW YQKYHKGVPS GDIKKTGEKS EYIHGTVIRF RADREIFGEL 
EYDYEILLAK LKEIRGIKVI LCDERNEAAG KTESFYFNGE IREFLK