Gene Smon_0481 details

Gene Information

• Locus tag: Smon_0481
• ID: 8600199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptobacillus moniliformis DSM 12112
• Kingdom: Bacteria
• Replicon accession: NC_013515
• Strand: +
• Start bp: 557250
• End bp: 560708
• Gene Length: 3459 bp
• Protein Length: 1152 aa
• Translation table: 11
• GC content: 30%
• Product: DNA-directed RNA polymerase, beta subunit
• Protein accession: YP_003305838
• Protein GI: 269123261

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAACA AACTAATTAA AAGATATAGT TTTGGGAAAA TTAAAGATAG GGGAGAAATG 
CCCAATTTTT TAGAATTTCA GCTAGATTCT TATGAAGATT TTTTACAAAC AAAAAGATCT 
TATGATGTAA GAGAATTAAA AGGACTTGAG GCAATATTCC AAGAAACATT CCCAATAGAA 
TCTGCTAATG GTACTTTAAA ATTAGAATAT TTTGGGTATG AAATACATGA TAGTGAGGCA 
CCATTAAATG ACGAGTTAGA ATGTAAAAAA AGAGGAAAAA CATATTCAGG TCAATTAAAA 
GTTAGATTAA GATTAACTAA TAATAAAACT GGAGAAATTA AGGAAACATT GGTACATTTT 
GGAGATATAC CTTTGATGAC TGATAAAGCT ACTTTCATAA TAAATGGAGC AGAAAGGGTA 
GTTGTTTCTC AATTACATAG ATCACCAGGT ATTACCTTTA ATAAGGAATT AAATATGCAA 
ACTGGTAAAG ATATGTTTAT TGGTAAAATT ATTCCATATA AAGGAACTTG GCTTGAATTT 
GAAACAGATA AAAATGATGT TTTAAATGTG AAAATTGATA GAAAGAAAAA AGTATTAGCA 
TCTGTATTTT TAAAAGCAAT TAAATTTTTT GAAAATAATT CTGAAATAAT GGATGAATTT 
TTTGAAATTA AAACTATAGA GCTTGAACCT ATATATAAGA AATATAAGAA TATAGAAGAT 
GCTAAAAGCG TTATTAGAAC AGAAATAGAA GGTTCATTTG TTAATGAAGA TATAGTAAAT 
GAAAAAACAG GAGAAATAGT AATAGAATCA GAAAGTTTCA TAGATGAGAT TACTGTAGAT 
AAGTTAATTG AATATAACAT TCCTGAAATT ACTATATGGG AAGTAAAACC AGAAGATAGA 
ATGATAGCTA AATCAATTAA AGATGATCAT ACTAAATCAT CTGATGAAGC TGTAGTAGAA 
GTATTTAAAA AAATAAAACC AGGGGATATA GTTACAGTAG AGAGTGCATA TAATTTAATT 
ATACCTATGT TCTTTAATCC TCAAAGATAT GATTTTGCAC CAGTTGGAAG ATATAAGATC 
AATAAGAGAT TAAAACTTGA AGGTGAAATC AATGAGCAAG ATATAGTATT AACAAAAAAA 
GATGTAATAG CAACTATAAA TTACTTGAAA GTTCTATATA ACGGTGGGGG AAGCACTGAT 
GATATAGATA ATTTATCAAA TAGAAGGGTA AGAGGAGTAG GAGAGCTACT ATCTATACAA 
ATTAAAGGTG GAGTAGCTAA AATGTCTAAA ATGGTTAAAG AAAAAATGCA AACTCAAGAC 
ATTAATACTT TAACACCTCA AAGCCTATTA AATACTAAAC CATTAAATGC ATTAATATTA 
GAATTTTTTG GTAGTGGACA ATTATCTCAA TTTATGGATC AATCAAATCC ACTTGCTGAA 
CTTACTCATA AAAGAAGAAT ATCTGCTTTA GGACCTGGAG GATTATCAAG GGATAGAGCA 
GGATTTGAGG TTAGAGACGT TCATAATTCT CATTATGGAA GAGTTTGTCC AATAGAAACT 
CCAGAAGGAC CAAATATAGG GTTAATAGCT TCACTTTCAA CTTATGGTAA AGTAAATAAA 
TATGGATTTA TTGAAACTCC TTTCGTTAAA GTTAAAGATG GAGTAGCTGA TTTTAATGAT 
ATTAGTTATC TTGCAGCTGA TGAAGAAGAA GGATTATTTA TAGCCCAAGC AGATACTAAT 
ATAGATGAAA AAGGAAGATT ACTTGATAAT GATGTTACAT GTAGATATGG TGATGAAATA 
GTTCATGTTA AAAAAGAACA AGTTGATTTA ATGGATGTTT CACCTAAACA AATAGTTTCA 
GTATCAGCAG GATTAATTCC ATTTTTAGAA CATGATGATG CTAACCGGGC ATTAATGGGT 
TCAAATATGC AAAGACAAGC AGTACCATTA CTTAAAACAG AAGCTCCTTA TGTAGGAACA 
GGTCTTGAAA GAAAAGTTGC TATAGATTCT GGAGCTGTAC TTGTATCAAA AGTAAAAGGA 
GAGGTTACTT ATGTTGATGC AAGTAAGATT ATAGTTACAG ATAAAAAAGG AGATGAACAT 
TTACATAGAT TATTAAATTT TGAAAAATCT AACCAAAGTA TGTGTTTACA TCAAAAACCA 
ATAATAGATT TAGGAGATAA AGTAAATAAA GGGGACATAT TAGCAGATGG ACCATCTACT 
TCAGGTGGAG ATTTATCTTT AGGTAAAAAT ATATTACTTG CATTCATGCC TTGGGAAGGA 
TATAACTTTG AGGATGGAAT ATTAATATCA GAAAGATTAA GAAAAGATGA TGTATTCACA 
TCACTTCACA TAGAAGAATT TGATATTGAA GCAAGAACTA CAAAACTTGG AGAAGAAGAA 
ATTACAAGAG AAATACCTAA TGTATCTGAA GAAGCTTTAC GTAATTTAGA TAAAGACGGT 
ATTGTAAGAA TAGGTGCTTA TGTTGAACCA GATGATATCT TAGTTGGTAA GGTAACTCCT 
AAAGGAGAAA GTGAACCACC TGCTGAAGAA AGATTATTAA GAGCAATCTT TGGAGAAAAA 
GCTAAAGATG TAAGAGATAC ATCATTAAGA TTACCACATG GAGTTAAAGG TACAGTAGTA 
GATGTATTGG TATTATCTAA AGAAAACAAA GATGATTTAA AAGCAGGAGT AAATAAAGTA 
GTAAGAGTTT ATGTTGCAGA AAAAAGAAAA ATAATGGTTG GAGATAAAAT GTCAGGAAGA 
CATGGTAATA AGGGGGTTAT ATCTCGTGTA TTACCAGTTG AAGACATGCC ACATTTAGAA 
GATGGTACTC CAGTTGATGT TTGTTTAAAT CCATTAGGGG TTCCATCTCG TATGAATATA 
GGGCAAGTAT TAGAAGTTCA CTTGGGACTT GCTATAGGAG ATATGAACAA ATATATTGCA 
ACACCAGTAT TTGATGGTGC AACTGAAGAA GATGTTAAAA ATTATTTAGA AGAAGCTGGA 
TATCCTAGAA CTGGAAAAGT TAAGCTAATT GATGGTAGAA CTGGAGAATA TTTTGACAAT 
CCAGTAACAG TAGGAAGAAT GTACATGTTA AAATTACATC ATTTAGTTGA AGATAAAATG 
CATGCTAGAG CAATAGGACC ATATTCACTA GTTACTCAAC AACCACTTGG AGGTAAAGCT 
CAATTTGGTG GACAAAGATT AGGGGAAATG GAAGTTTGGG CTCTTGAAGC ATATGGAGCT 
TCAAATATCC TTCAAGAAAT GTTGACTGTT AAATCAGATG ACATTAATGG TAGAACTAAA 
ACTTATGAAT CAATAATTAA AGGACAATCA ATGCCAGAAG CAGATGCTCC TGAATCATTT 
AAAGTATTGA TTAAAGAGTT CCAATCTTTA GGACTGGATG TAAATCTATA TAATAAAGAG 
GGAGAAAAAA TAGAATTAGA CAATAACTTT GAAGGATAA 

 

Protein sequence

MNNKLIKRYS FGKIKDRGEM PNFLEFQLDS YEDFLQTKRS YDVRELKGLE AIFQETFPIE 
SANGTLKLEY FGYEIHDSEA PLNDELECKK RGKTYSGQLK VRLRLTNNKT GEIKETLVHF 
GDIPLMTDKA TFIINGAERV VVSQLHRSPG ITFNKELNMQ TGKDMFIGKI IPYKGTWLEF 
ETDKNDVLNV KIDRKKKVLA SVFLKAIKFF ENNSEIMDEF FEIKTIELEP IYKKYKNIED 
AKSVIRTEIE GSFVNEDIVN EKTGEIVIES ESFIDEITVD KLIEYNIPEI TIWEVKPEDR 
MIAKSIKDDH TKSSDEAVVE VFKKIKPGDI VTVESAYNLI IPMFFNPQRY DFAPVGRYKI 
NKRLKLEGEI NEQDIVLTKK DVIATINYLK VLYNGGGSTD DIDNLSNRRV RGVGELLSIQ 
IKGGVAKMSK MVKEKMQTQD INTLTPQSLL NTKPLNALIL EFFGSGQLSQ FMDQSNPLAE 
LTHKRRISAL GPGGLSRDRA GFEVRDVHNS HYGRVCPIET PEGPNIGLIA SLSTYGKVNK 
YGFIETPFVK VKDGVADFND ISYLAADEEE GLFIAQADTN IDEKGRLLDN DVTCRYGDEI 
VHVKKEQVDL MDVSPKQIVS VSAGLIPFLE HDDANRALMG SNMQRQAVPL LKTEAPYVGT 
GLERKVAIDS GAVLVSKVKG EVTYVDASKI IVTDKKGDEH LHRLLNFEKS NQSMCLHQKP 
IIDLGDKVNK GDILADGPST SGGDLSLGKN ILLAFMPWEG YNFEDGILIS ERLRKDDVFT 
SLHIEEFDIE ARTTKLGEEE ITREIPNVSE EALRNLDKDG IVRIGAYVEP DDILVGKVTP 
KGESEPPAEE RLLRAIFGEK AKDVRDTSLR LPHGVKGTVV DVLVLSKENK DDLKAGVNKV 
VRVYVAEKRK IMVGDKMSGR HGNKGVISRV LPVEDMPHLE DGTPVDVCLN PLGVPSRMNI 
GQVLEVHLGL AIGDMNKYIA TPVFDGATEE DVKNYLEEAG YPRTGKVKLI DGRTGEYFDN 
PVTVGRMYML KLHHLVEDKM HARAIGPYSL VTQQPLGGKA QFGGQRLGEM EVWALEAYGA 
SNILQEMLTV KSDDINGRTK TYESIIKGQS MPEADAPESF KVLIKEFQSL GLDVNLYNKE 
GEKIELDNNF EG