Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_2242 |
Symbol | |
ID | 8593801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 2249580 |
End bp | 2252465 |
Gene Length | 2886 bp |
Protein Length | 961 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | diguanylate cyclase |
Protein accession | YP_003305289 |
Protein GI | 268680858 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.031286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTAAGCA AAAACAAACA ACATATTGTC AAATGGATTG TTTTTTTGCC AATAGTAGCC GTTTTGCTGA CATTTGTTAT TTTATTAACA ATGGTTATCT CTATGGAGCA AACTGACTAT GAAAAATCTC TTGAACAAGC CAGAATTTCG TATGTGAAAC GCTCTAAAAT TCAAGCGCAA GAACGTATTG ATAAGTTGAT TGATTATATT AACGTCAATG AAAAACTTTT GCGTGAAGAA GCCGAAGAAG AGATCGCCAA TATGGTTGAT TTGGCACATA GAATCATGGT AGATATTTAC AATGAAAACC CAACATTACC TCGTGAAAAA ATCATCCAAA AAATCAAAGA CAAGCTTAAA GATGTTCGAT TTTTCAATGA CTTGAGTGGG TATTATGCCT TGTTTGATTT TGAGGGAAAA TGTGTCATGC ATGGACTCGA TGAGTCACTT GAGGGTAAAA ATATGCTCAA TTACCAAGAT AGGGATGGTT ATTTTTTTAT TCAAGAGATG ATTGCGCATC TTAAAGAGAG TGCTTCGTAT GCCATGACAT GGCGTTGGAA AAATCCCACG GATGCGACTC ATCGTAAAAA GATAGGCTAT GCAAAACGCG TTGAGCCTTT AAATCTTTTT ATTGTAAGTG GTCGCTACGA AGATGCGATT TTGGAGAAGA TTAAAAAAGA GACACAAAAA GTGCTTTTAA ATACACGCTA TGGAGAGCAT GGCTATATTT TTGCGTATGA TTATGAGGGC AATACCATTT CTCATGGAGA CCACTCCTTT GTAGGAAAAA ACAGACTTAA TGTCGTGAGT GACAATCAAC TGGTTATTCG AGATATCGTT GTAGGGGGAA AGCTGAATGT TGAGGGCTTT TTTATGCACT ACATTGCCTC GTATCACCCT TTGGATAAAG ATAGACAAAA AGTCTCTTTT ATTCGTCCTA TTCCGCAGTT TGAATGGGTG GTGGGTACAG GCACGTATCT TTTAGAAGAG AACAATGCCT TTTTGGAACA AGCAAAGATG CTTAAAACCA AAATGCAAAC GACCATTGCG AATTTAGTCA TTATCTCTTT AGTGATTATG TGTTTGATTA TTGTGATGAT GTTTCTTATC TCTGTTAAAC TGCGTTCTTT ATTGGCACGT TATGAGAACC ACTTACTGCT CAATAACAAA CAGATTAAAG AGCAAAAGAT GGTTTTTGAA ACCTTGTATC AAAAATCAGC GGATGGCATT TGGCTTTTAA AAGAGGGACT TTTTATTGAT TGCAATGAAG CTATTATGAA AATGTTTAAA ACCACCGATA AACAGAAGTT GATTAACGTG AGTTTAGCCG ATTTGTCACC TGAATTTCAG CCTGATGGGC AAAGCTCGTA TGAAAAATCC AGATGGATGA ACTCCATCGC TTCTAAAGAG GGCGTTCATA AGTTTGAATG GTATGCCAAA GCCTGTGATG GAACGTTGAT ATGGATTAGT GTGGTGATGA CAACGGTGAT GATGAATAAG GGTAAAATCC AACACTGTTC CATCCGTGAT ATTACCGCAC GAAAAGCGCT TGAAGAAGAG AATAAAAAAC AGAAAAAACT TTTGATGCAT CAAGTCGAAC ATGATATTTT AACAGGACTT CCTAACCGCA ATCTGCTTCA AGACAGGCTC ACCCAAGCGA TTAAGAAAGC GAGTCGTGAT GGCAAGGTTT TGGGCGTTAT GTTTGTGGAT GTGGATAAAT TTAAAAATAT CAACGACTCC CTCGGACACG ATGCGGGGGA TATGCTTTTA AAAACGATTG CCAAACGGAT GCAGCATAGT ATTCGAGAGA CTGATACGGT TGCACGTTTG AGTGGAGATG AGTTTATCGT GCTTTTAGAT GGGTGCAAAG ATGTCAATGA TATTTTTGTG GCGATTAAAA AGCTTATCAA TGCTTTTCAA GAACCATTTA TATTTGGAAA TGAGAGTTTT AAAGTGACGA TGAGCATCGG GGTGAGTGTC TATCCCAACG ATGGTGAATT GGCGAGTAAA TTGCTTAAAA ATGCCGATAT CGCGATGTAT AAAGCAAAAT CTCAAGGGCG AAACCGTTAC ATCTTTTTTG ATCAAGAGAT GAATCAAGAG ACTAACGAGC ATTTAGAGGT TGAAAAGAGT TTGCATAAAG CCCTTGTCAA TCAAGAATTT GTACTGCATT ATCAGCCTCA AGTCAATTTA AAATCGGGAA AAATTATAGG CTTTGAGGCG TTGCTTCGAT GGAAACATCC TAAAAGGGGA TTAACCGCAC CGGGCTATTT TATTCACGTG GCAGAAGAGA GCGAGTTGAT TATTGAGATT GGAAATTGGG TGATTAAAGA GGTCATGCGC CAGTTAAAAG AGTGGCATGA CAAGGGGTTG CGTCCAGGTA AAGTAGCCAT TAATATTGCA GGGAAACAGC TTGAATCCAA CCATCTTATT GCGTTTATTT TACAAAATCT CAAAGAAAGC GGGTGTCGTC CAGAGTGGAT TGAGCTAGAG ATTGTAGAGC GGTTTATTAT GAAAGATGCC ACCAAATCCA TCGCCCTTTT GAAGCGCTTT AGGGAGCTTG GGCTTGACAT TTCCATTGAT GATTTTGGCA CAGGACACTC CTCTTTGGCA TACTTGAAAG AGTTGCCTAT CACAAAGTTG AAAATTGACC AAAGCTTTGT GCAGAATTTA GAAAATAGCA GTGAAGATAG AGCGATTGCT CGAACGATTA TCGAGTTAGG TCGAGGTTTG GGCTTGGTCG TTTTGGCTGA GGGCGTAGAG ACGAAGGCGC AAAAAGAGTT GATTCATAGT AGCGGGTGTG ATTTGATTCA AGGCTATGTC TTTAGTAAAC CTGTGGATGC TAAGAGCGTT GAAGAGATGT TGAAAAATCA ATCTCACATG CTATAA
|
Protein sequence | MLSKNKQHIV KWIVFLPIVA VLLTFVILLT MVISMEQTDY EKSLEQARIS YVKRSKIQAQ ERIDKLIDYI NVNEKLLREE AEEEIANMVD LAHRIMVDIY NENPTLPREK IIQKIKDKLK DVRFFNDLSG YYALFDFEGK CVMHGLDESL EGKNMLNYQD RDGYFFIQEM IAHLKESASY AMTWRWKNPT DATHRKKIGY AKRVEPLNLF IVSGRYEDAI LEKIKKETQK VLLNTRYGEH GYIFAYDYEG NTISHGDHSF VGKNRLNVVS DNQLVIRDIV VGGKLNVEGF FMHYIASYHP LDKDRQKVSF IRPIPQFEWV VGTGTYLLEE NNAFLEQAKM LKTKMQTTIA NLVIISLVIM CLIIVMMFLI SVKLRSLLAR YENHLLLNNK QIKEQKMVFE TLYQKSADGI WLLKEGLFID CNEAIMKMFK TTDKQKLINV SLADLSPEFQ PDGQSSYEKS RWMNSIASKE GVHKFEWYAK ACDGTLIWIS VVMTTVMMNK GKIQHCSIRD ITARKALEEE NKKQKKLLMH QVEHDILTGL PNRNLLQDRL TQAIKKASRD GKVLGVMFVD VDKFKNINDS LGHDAGDMLL KTIAKRMQHS IRETDTVARL SGDEFIVLLD GCKDVNDIFV AIKKLINAFQ EPFIFGNESF KVTMSIGVSV YPNDGELASK LLKNADIAMY KAKSQGRNRY IFFDQEMNQE TNEHLEVEKS LHKALVNQEF VLHYQPQVNL KSGKIIGFEA LLRWKHPKRG LTAPGYFIHV AEESELIIEI GNWVIKEVMR QLKEWHDKGL RPGKVAINIA GKQLESNHLI AFILQNLKES GCRPEWIELE IVERFIMKDA TKSIALLKRF RELGLDISID DFGTGHSSLA YLKELPITKL KIDQSFVQNL ENSSEDRAIA RTIIELGRGL GLVVLAEGVE TKAQKELIHS SGCDLIQGYV FSKPVDAKSV EEMLKNQSHM L
|
| |