| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sdel_1885 |
|---|
| Symbol | |
|---|
| ID | 8593438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurospirillum deleyianum DSM 6946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013512 |
|---|
| Strand | - |
|---|
| Start bp | 1918045 |
|---|
| End bp | 1921170 |
|---|
| Gene Length | 3126 bp |
|---|
| Protein Length | 1041 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
|---|
| Protein accession | YP_003304935 |
|---|
| Protein GI | 268680504 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000188318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCTC ACTTTTTTAT CCATAGACCC ATTTTTGCGT GGGTTATTTC CATTGTTATT
ATGCTCACAG GCGTAGGGTC TATCTTAACG TTGCCTGTGG AACAATACCC TGATATTGCA
CCTCCTTCTA TTCGTATTGA TACAACCTAT ACAGGTGCTT CAGCGCAAAC GGTTGAGAAT
AGCGTGGTGC AGATTATTGA ACAGCAACTC ACGGGATTGG ATGGGCTTTT ATACTTCTCT
TCTAGCAGTA GTTCTGCGGG TACGGCACGC ATTGATGTGA CGTTTGAAAA AGGAACGGAT
GCCGATACAG CGCAAGTTCA AGTGCAAAAT AAAGTCGCAC AAATCACCAC CCGTTTACCC
AAAGCGGTTC AAGATGAGGG TGTGCGTGTC ACCAAAGCAC AGAGTGACTT TTTGATGATT
TTTGCTTTAT ACGATAAGAG TAACACCCGT ACATCGGTGG ATGTTGCCGA TTATCTTTTA
AGTACTATGC AAGATCCCAT TGCTAGGCTT GAGGGCGTAG GAACAGTACA AGTCTTTGGT
GCGCAGTATG CGATGCGTAT CTGGTTAGAC CCGTATAAAT TGGCTTCGTA TGGTTTGATG
CCTTCTGATA TTAGCAGTGC GATTAGCAAT CAAAATGTGC AAGTTTCCGC AGGAAGCATT
GGGGCACTGC CTAGTGCATC TGATCAGCAA CTTAATGCAA CTGTGACAGC AAAATCACAG
TATCAAACGC CAGAACAGTT TGAAAATATC ATTGTTAAAA GTGATAGCAA TGGTGCGATT
GTGCGATTGC GTGATGTGGC ACGGGTTGAA TTGGGGAGTG AGAGTTATAA AAATGTGACC
CGACTCAATG GCTATCCAGC CGCAGGTCTT GCCGTGATGT TAGCCCCAAG TGCCAATGCA
CTTTCAACGG CGGATCGTGT CAAATCAACG ATTGCTAAAA TGAAACCCAA TATGCCTGAG
GGATACGAAG TTGCCTATCC TCGTGATAGT ACACAATTTA TTCGTATTTC CATTGAAGAG
GTCGTTAAAA CCCTTTTTGA GGCGATTCTT TTAGTCGTTG TGGTCATGTT TGTTTTCTTG
CAAAACTGGA GAGCAACACT CATTCCTGCG ATTGCAGTAC CTGTTGTTCT TTTGGGAACG
TTTGGGGTGT TAGAGATTTT TGGTTACTCC ATTAATACGC TGACCATGTT TGGTATCGTG
CTTTCTATTG GACTTTTGGT AGATGATGCG ATTGTTGTCG TGGAAAATGT AGAGCGTATT
ATGCGTGAAG AGAAATGCTC TGCGATGGAA GCCACCGAAA AATCTATGAA AGAGATAACC
AGTGCACTGA TCGGTATTGC CACGGTTCTC TCAGCCGTTT TTCTTCCAAT GGCATTTTTT
AGCGGTTCTA CGGGAGTTAT TTACCGTCAA TTTTCGATTA CGATTGTCTC TTCGATGGTG
CTTTCTGTCA TTGTGGCATT GACCTTGACA CCAGCGCTGT GTGCCTCGTT ACTCAAACCG
CATGAAGCAG TACCGCACAA AGGTTTTTTT GGCTGGTTTA ACCGTATGTT TGACACTTCT
ATTGAGCGTT ATAAAATGAG CGTGGGAGGA GTTATCGCAA AGCCTATTCG TTGGATGATG
GTTTATGGTG TCATTACGGC GGCAATGGCA TTTTTAATCT TACGCCTTCC TTCTGGATTT
TTACCCGATG AAGATCAAGG GAATATTATG GTTCAGATGA ACTTACCTGA GGGTGCTTCC
TTTAAACGTA CGGATGCTGT CGCGAAAGAA ATAGAGCGTT ATTTTCTAGG GCAAGAGAGC
AATAATACCG AAGCCATTTT TACCATTTCA GGATTTAACT TCAGTGGTAG CGGTCAAAAT
GCGGGTATGG CATTTGTTGC CTTAAGCGAT TGGGATGAAA GAAAAGGCAT TGCCAATCGT
TCCGATATGA TTGCGTCTCG TGCAACCCAA AATTTCTCCA AGATACGTGA TGCTCAGGTC
TATTCACTCA ATCCTCCTTC CATTCGGGGG TTAGGACAGA GTAATGGATT TACCTTTCAG
CTTCAAGGCT TAGCAGGGAC GGATAGAGAG ACTCTTAAAA CGCTTAAAGA TAGTTTTGTC
AATTCGGTAC GGGAGGAGAG CCTTTTTACC TCGGTGCGTT TAGGTAGTTT GGGTGAGACA
CCACAATTAC ATGTAAAGAT TGATGAAGAT AAAGCAGTGG CATTAGGGCT TTCCCTCTCT
GAGATTGATA ATACACTCAG TTTTGCGTGG GCAGGAAAGT ATGTCAATGA CTTTGTCGAT
CGGGGTCGGG TGAAGAAAGT GTACGTGCAA GGTGATGCGC CGTTTCGCTC AAAGCCTGAG
GATTTGGATC TGTGGTATGT GCAAAATAAA GACAATGTCA TGACGCCTTT TTCTGCTTTT
GCAACGACGT ATTGGAGTTA TGGAGCACAA AGTCTTACAC GTTATAACGG CTTAGCCTCC
TATGAAATTC AAGGTGCCGC AGCGCATGGC ATTAGTTCAG GCGTGGCGAT GGATAGGATG
GAGGAACTTC AAGAAGCCTT ACCTTTAGGA ACCAGTTTTG CGTGGAGTGG GCTTTCGTAT
CAAGAGCGAT TATCCAGTGG TCAAACGATG AAGCTTTATG CCCTTTCGAT ATTGGTGGTC
TTTTTATGTT TGGCGGCATT GTATGAGAGT TGGTCAGTTC CTTTTTCAGT CCTTTTGGTC
ATTCCTTTGG GTATTTTTGG TTCTGTTTTA GCAGCGTATG TGCGAGAGTT GAACAACGAT
GTCTATTTTC AAGTTGCTCT TCTTACAACC ATAGGACTCT CTTCTAAAAA TGCCATTTTG
ATTGTGGAGT TTGCGGAGAT GGCGTATACC CAAGGTAAAG GATTGGTGGA AGCGGCGATT
GAAGGAGCGA AGCTTAGACT TCGACCTATT TTGATGACTT CTTTGGCATT TATCGCAGGG
GTCCTGCCTT TGGCACTTTC CAGTGGTGCG GGGGCAAACA GTCGTATTTC CATTGGTACG
GGAATTATTG GAGGAACACT TAGTGCGACC TTTTTAGCGA TTTTTCTCGT ACCTCTTTTC
TTTGTGTTGG TACGGGGACT TTTTCCTAAA CGTAGCCATC ATGCAACCAT GATGGGGGAG
GTGTGA
|
|---|
| Protein sequence | MIAHFFIHRP IFAWVISIVI MLTGVGSILT LPVEQYPDIA PPSIRIDTTY TGASAQTVEN
SVVQIIEQQL TGLDGLLYFS SSSSSAGTAR IDVTFEKGTD ADTAQVQVQN KVAQITTRLP
KAVQDEGVRV TKAQSDFLMI FALYDKSNTR TSVDVADYLL STMQDPIARL EGVGTVQVFG
AQYAMRIWLD PYKLASYGLM PSDISSAISN QNVQVSAGSI GALPSASDQQ LNATVTAKSQ
YQTPEQFENI IVKSDSNGAI VRLRDVARVE LGSESYKNVT RLNGYPAAGL AVMLAPSANA
LSTADRVKST IAKMKPNMPE GYEVAYPRDS TQFIRISIEE VVKTLFEAIL LVVVVMFVFL
QNWRATLIPA IAVPVVLLGT FGVLEIFGYS INTLTMFGIV LSIGLLVDDA IVVVENVERI
MREEKCSAME ATEKSMKEIT SALIGIATVL SAVFLPMAFF SGSTGVIYRQ FSITIVSSMV
LSVIVALTLT PALCASLLKP HEAVPHKGFF GWFNRMFDTS IERYKMSVGG VIAKPIRWMM
VYGVITAAMA FLILRLPSGF LPDEDQGNIM VQMNLPEGAS FKRTDAVAKE IERYFLGQES
NNTEAIFTIS GFNFSGSGQN AGMAFVALSD WDERKGIANR SDMIASRATQ NFSKIRDAQV
YSLNPPSIRG LGQSNGFTFQ LQGLAGTDRE TLKTLKDSFV NSVREESLFT SVRLGSLGET
PQLHVKIDED KAVALGLSLS EIDNTLSFAW AGKYVNDFVD RGRVKKVYVQ GDAPFRSKPE
DLDLWYVQNK DNVMTPFSAF ATTYWSYGAQ SLTRYNGLAS YEIQGAAAHG ISSGVAMDRM
EELQEALPLG TSFAWSGLSY QERLSSGQTM KLYALSILVV FLCLAALYES WSVPFSVLLV
IPLGIFGSVL AAYVRELNND VYFQVALLTT IGLSSKNAIL IVEFAEMAYT QGKGLVEAAI
EGAKLRLRPI LMTSLAFIAG VLPLALSSGA GANSRISIGT GIIGGTLSAT FLAIFLVPLF
FVLVRGLFPK RSHHATMMGE V
|
|---|
| |