Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1727 |
Symbol | |
ID | 8593278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 1753745 |
End bp | 1755103 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | type I secretion outer membrane protein, TolC family |
Protein accession | YP_003304777 |
Protein GI | 268680346 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000826676 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACTTAA AATCTGTAAG TTTTACGCTC TTGATGCTCA CACCTTTGGT GTTTGCAGCA GAGTTTGATC CGCTTAATAC ACATGCACTC GTTTCACCCA ATGAGATGAA GCAAAATGCC TGTCATAACG TTGATTTAGA GAAGGAATTG ACGTTAAGTG ATGTGATCAA CATGGCACTT TGTCACAATC CTCAAACCAA AATCGCATGG GAAACCTCTT TATATCATGC TGCTCAGGTG GGAATGAGTC GTGCAGCGTA TTTGCCAACC TTGAGCGCTT CAGGTTCAGC ATCGAGGGGT ACGAACAGTG AAACGATGAC AGGAAATAGT GAAAATATCA GCGTTACGCT CTCTTACTTG CTCTATGATT TTGGTAAACG AGATGCTTCG TATGACAATA CACGTGCGTT GTTGGATGCC GCATTGTACT CAGAAAACGA TACTCTTCAA ACGGTTTTTC TCTTAGCGCT TGAAGCCTAC TATAACCTTT TTGGTTCTCA AGCAAGTTTA GATGCGGCGT ATGAGGCAGA GCGTTCTGCT TTTGAAAGTC TTAATGCTGC TAAAACACGT TATGGTGTGG GTGTTGTAAC GCCCGCAGAT ACGCTTCAAG CTCAAACGGC GTATTCTCAA GCGATGCTCA ATCGCATTCA AGCGCAAGGC AATCTTAAAA CAGCACAAGG TGAATTGGCT GCTATTTTAG GTTTATTGCC TGATACTTCT TTGCGTCTTC GTGTTCCTAA GCTATCTCTT CCTGATGGCT CGTTTGAAAA AAACATACGG GCATTGATGG AAGAAGCACA ACGACTTCGC CCTGATTTGA TGGCAGCGAG TGCCAAAATC AAAGCAAGTG AAGCGAGTCT TAAAGCTGCT AAAGCGGAGC ATTTACCCAG TTTTTCACTC AGTGCGACGA AAGGCTCCAC GGAGACGGTT TACAATACCA CGCAACGTAA TTCGAGTATT GGGCTTTATG TGAGTATCCC TATCTTTACA GGATTTAATA CTAAATATAA AGTGCAAGCA GCACAGCAAC AGCTGAAAAT CTCTGAGGCT GAGTATGAGA GGCTCTCTCA AGATGCCAAT TTGGAAGTGT ACAAAACCTA CCAAACGTTA GTCAGTCAGA CGCAAGCGAC ACGAACGAGT GCCGATTTGG TAGCCAGTGC ACAGGCCTCG TATGATTTAG CTTTGGGACG TTATAAGGCT GGAGTGGGAA CTATTTTGGA TCTTCTCAGT GCACAAAGTG CGCTTGCAAG TGCAAAACAG CAACATATTC AAGCGTTGTA TACGTGGTAT ATTAGTAAAG CAACCCTCGC AAAATCGATG GGTTCTCTCG ATTTTTCTGT GATTAAAGGA CAACCATGA
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Protein sequence | MHLKSVSFTL LMLTPLVFAA EFDPLNTHAL VSPNEMKQNA CHNVDLEKEL TLSDVINMAL CHNPQTKIAW ETSLYHAAQV GMSRAAYLPT LSASGSASRG TNSETMTGNS ENISVTLSYL LYDFGKRDAS YDNTRALLDA ALYSENDTLQ TVFLLALEAY YNLFGSQASL DAAYEAERSA FESLNAAKTR YGVGVVTPAD TLQAQTAYSQ AMLNRIQAQG NLKTAQGELA AILGLLPDTS LRLRVPKLSL PDGSFEKNIR ALMEEAQRLR PDLMAASAKI KASEASLKAA KAEHLPSFSL SATKGSTETV YNTTQRNSSI GLYVSIPIFT GFNTKYKVQA AQQQLKISEA EYERLSQDAN LEVYKTYQTL VSQTQATRTS ADLVASAQAS YDLALGRYKA GVGTILDLLS AQSALASAKQ QHIQALYTWY ISKATLAKSM GSLDFSVIKG QP
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