Gene Sdel_1564 details

Gene Information

• Locus tag: Sdel_1564
• ID: 8593104
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 1577942
• End bp: 1579906
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 44%
• Product: TonB-dependent receptor
• Protein accession: YP_003304615
• Protein GI: 268680184

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.364337
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCAAAA AAGGCGTTTT AGGGCTGAGT TTAGTAGCTT CGTTGTGTTT AATCCCCCGT 
GTTGTTTTAG CCGATGCTTT TGTAACCTTA GAGAGTGTGA CCTTACTGGA AGAGTCTCTC 
AGTGGCATTG GTGAGGCTAA AGTGATTTCT AAAGAGAGTT TAGAGAAAAA TCAAGCCAAA 
GAGATGAAAG AGGTCTTTAA AAATGAGCCT TCTATCTCGG TGGGTGGTGG GGCGAGAAAT 
GCTCAACGTG TCTATTTACG AGGCATAGAA GGAACCAACC TTAACATTAC CATTGATGGT 
GCAAAGCAGG GTGGAAGTTT GTTTCAGCAC ATGGGTGATG TGGGAAGCAT TGACCCTTCT 
TTGCTTAAAA GTGTTGAGGT CTCGACCATC GCAGGAGCCG ATAAAGGCAA TGGCGCACTG 
GGCGGAAGCA TTGCGTTTGA AACGGTGGAC GCGCAAGATT TGCTCACGGA GGGGCAAGAG 
TTAGGCGCAA CGCTTAGGGG TGGTTATTAC AGTGCTTCCA AAGGTGTGCG TGGTGGAACT 
TCGCTCTATG GAAAAAGTGG GCATGTGGGC ATTTTGTTCG ATGTTTCAGG GCTTAACCAG 
CATGATTACC GTACAGGTGA GGGTGGTGAT GCCGATAATA CGGCGGTAAA AGATAGAAAC 
TATTTTTTCA AAGCGAGTTT GCTGGATTAT TATGACCATA GTTTAAAACT AGGGGCGACG 
CATACCACCA ACGATGGGCA TTATATCGCA GGAAGTTCTG GAAGTGATAT GGGTGTGCCT 
AATCCCAATA CGCCAACCAG TCATATTCTC ACCACCAGAG ATACCTATAC ACTCGATTAT 
CGTTACAATC CTGCAAGCGA GTGGATTGAT CTTAAAACCA ATCTGTACTA CAACGACCGC 
AATTATGACA ATCAAACCAA CAATACCGAT GTGACCAGTG AAAACTACGG TGGAAACATT 
AAAAACAGTT TTGGTTTTGC AACAGGTGCT TTAAACCATT TTTACAGCGT GGGGATGGAT 
TATGACATTG AAGATGGTGT GACTCAAACC ACTTCAGGAG ACATCACCAA TACCTCTAAA 
ACCTTAGGAG CCTTTGTTCA GGGTAGTTCT AACTACAAAA TTGCCACCCT ACGTTATGGC 
GTGCGTTTGG ATGAGTACTC CATCGAATAT GGTCCTAGCA ATGAAGTCAC TGGGCATGAA 
TTTTCCCCCA ATGTTGGCTT AGATGTGGAG CTTTTTGAGG GACTAAACGC CTTTAGCAAT 
TACAGTGAAT CGATGAAAAT TGGCAGTGTT ATTCCGGTGC AATGGCTCTC GAACGCAACC 
GCTACTACCA CTTTTAATGG CACATTAAAT GGTGATTTGG AGCCTGAAAG CTCGAAGCAG 
ATAGAAGGGG GTCTTCGTTA TAAAAACAGA AGTCTCTTTA GCGATAGCGA TAGTATGACA 
CTAGGAATGA GCCTCTTTAA AACAACCATC TCTGATTTGA TTCGTAAAAA TCCAGCGGGT 
GGACCGACGA TTAGTAATAT TTACAACAGC GATGTGGATA TTATCTCCAA AGGCTACGAA 
CTTAAAGCCT CATACGCTCT GGCTCCTTTT AAAACCTCTT TGAGCTTTTT ACATGCCAAT 
GTGGAAGATG AAAACGGCGT AGCGATTTTG GAAAGAAGAG TCGCTGGTTC TGTGGGAGAT 
ACCTTTGTCT GGGACAATTC ATGGCGCATA AACCCAGAGT TTGCACTAGG TTATACGCTG 
ACTTCGGTAG GTAAAATGGA CGATGAGATT GAGCGGGGAA GTTATGTGGT ACACGACCTC 
TCTTTGGAGT ACACACCAGC ATCCATTAAA AATTTAACGC TCTATTTTGC GATTAATAAC 
CTCTTTGATA AAGAGTATTA CGCCCAGACA TCCATTGAAA GTGGCGATAC ATTGGTGGAA 
GAGGCGGGGC GGGATTTTAG AGCGTCCTTT AAATACGTAT TTTAA 

 

Protein sequence

MRKKGVLGLS LVASLCLIPR VVLADAFVTL ESVTLLEESL SGIGEAKVIS KESLEKNQAK 
EMKEVFKNEP SISVGGGARN AQRVYLRGIE GTNLNITIDG AKQGGSLFQH MGDVGSIDPS 
LLKSVEVSTI AGADKGNGAL GGSIAFETVD AQDLLTEGQE LGATLRGGYY SASKGVRGGT 
SLYGKSGHVG ILFDVSGLNQ HDYRTGEGGD ADNTAVKDRN YFFKASLLDY YDHSLKLGAT 
HTTNDGHYIA GSSGSDMGVP NPNTPTSHIL TTRDTYTLDY RYNPASEWID LKTNLYYNDR 
NYDNQTNNTD VTSENYGGNI KNSFGFATGA LNHFYSVGMD YDIEDGVTQT TSGDITNTSK 
TLGAFVQGSS NYKIATLRYG VRLDEYSIEY GPSNEVTGHE FSPNVGLDVE LFEGLNAFSN 
YSESMKIGSV IPVQWLSNAT ATTTFNGTLN GDLEPESSKQ IEGGLRYKNR SLFSDSDSMT 
LGMSLFKTTI SDLIRKNPAG GPTISNIYNS DVDIISKGYE LKASYALAPF KTSLSFLHAN 
VEDENGVAIL ERRVAGSVGD TFVWDNSWRI NPEFALGYTL TSVGKMDDEI ERGSYVVHDL 
SLEYTPASIK NLTLYFAINN LFDKEYYAQT SIESGDTLVE EAGRDFRASF KYVF