Gene Sdel_1561 details

Gene Information

• Locus tag: Sdel_1561
• ID: 8593101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 1574837
• End bp: 1576882
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 43%
• Product: TonB-dependent receptor plug
• Protein accession: YP_003304612
• Protein GI: 268680181

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000105774
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACGAA GAGTTTTTCT AGGAAGCGTT ATGGCAAGTG TGGCTTTGTG TGCGAGTGAT 
GTGCAGGTCT TGGACGAAAT CGTTACGATT GGTACAAAAA GTGAGAAGAG TGTAAGTGAG 
CAAACCACAA AAGTCGAAGT GATTACGCAA GAAGCCATAG AAAATTCAGG TGCGAGCAAT 
CTCTCCGAGG TTTTAAATGC GACACCGTGG CTCTATGTTG CACCTTCAGG AAAAAGCATC 
AGCATTCGAG GGATGGGGCA TGCTGATACA CTTTTGTTGA TTGATGGCAA ACGGGTCAAT 
GGAGAGTTTT CAAAAACCTA TGAGTTGGAG CGAATTCCCT CAGGTATGAT TGAGCGCATA 
GAGGTTTTAA AGGGGAGCTC CAGTCTGCTT TATGGCAGTG ATGCCATGGG TGGGGTGATT 
AATATTATCA CGAAAAAACC CACCAAAGAG GATGTGAGTG GCAATGTGCA AGTGATGGGT 
GGAAAAGATA AAGAGAGCGT GGATACTTTT GTCTCAGGCA GAGCGGATAA ACTCTCCTAC 
AGCTTTTATG CCAACTACCT TAACCGTGAT GCCTACTCAA AGTCTAAAAC CGCTGATGTC 
AAAGTGATGC AAGCAGGAAT CGAAAAATCT CCTTCTGCGC TAATCGGAGC AGGTGGATGG 
GCAAGTTTAC GAAGCAATCT TGCAAATAGT TATACCATAA GCAACAACTA CACCGATAAT 
TTAGAAACCA AAACGGTGGG TGGCTCTTTG GCGTATGAGT TTAGTGATTT TTTTAGAGCG 
TACATCGAAG CTTCGTATCT TGAAGAGAAA AAAGATGGGT TGTATATTAG CGATAGTTAT 
GCGACTAATT ATAAAAACGG TGGTAATACC ATTATGGCAA AATATATTCC AGCGCACCAA 
TACGATGACA ATCAGCGCTT TAACATCGCC ACAGGATTTG ATTATACGCC CAGTGATGCT 
TTACATGTAA AGTATAACCT TGCCTATTCA CGCTATGAAA AAGACAGAAA AGTCTACACC 
CCTTTGTGGA GTGAGTTAGG CTACGCATCC ATTGAGGCTT CCAAATCCAG CCTCAATGTC 
TCAACGCTAG AGTATCTCAC CAATGACGCA CAACTCACAT GGACGCTGGA TCAAAACAAT 
CGCATCGTTA CAGGTGCAGA ACACCGCATC CATGATGTAT CCTCCACGGC GTATGATGTG 
GACGATAGAA CCTATACGGG CGCTTTTATT CAGCATGAGA TGACACCATT GAAAAAACTC 
CATCTGGTGT ATGGAGTTCG TTACGATACA ACTTCCACTG ATGAAGAGGA GACCTCTTTG 
AGTGTTGGTG CGACGTATGA TCTTTTGGAG CGTTTAAAGC TTCGAGCCAG TTACGCTCAA 
GGGTTTCGAA GCCCTGATGA TAGAGAACTC TATGTCAATC AAACCAATCC CAATGGTAAA 
AAGATATTAG GCGCAACCGT GATAGATACG AGTGTTGGGA AGAGTTCACA GTATGATTTA 
AAGTCTGAGA CCAGTGAAAC CTTTGAGGTG GGTTTTCTAA CACATGGCGA TGCTTGGATG 
TTTGATGTTG CAGCTTTTAA GACGAACATT GATGATAGAA TCTCTCAAGT TGCTTACAGC 
AACTACACCA CCTTTGAAAA CATTAGCGAC AGTGAAATTA AGGGGATTGA AGCAACTTTT 
GATGTGGGAT TGCATGAAAC ACTATGGCTT CAATTAGGCT ATAACATTCA AGATGCGCAA 
AACAAAACAG CGCATACCAA ACTCACAGAT GTTCCAAGAC GTATGGCTAG TGTGAGTCTT 
AGTTACACAC CTATTCATAA CCTAGAGTTT CGCTCAACCA CGAAGTATAT TGGGGAGCAA 
GAGGGGCTTG AGGGTGAAGA TGTGGGAGGC TTTAGCGTAA CCAATGTTAA GGTGATTGCT 
AGGGAGCTTT TCAAGAACAC CGATGTCTTT GCAGGCGTGG ATAATGTGTT TGAAAAGAGA 
ACTCCTGAGT ATCTAGGGCT TTTGCCTGAG TTTGCTTATT ATGTGGGTTT TAACTATAAA 
TTTTAG 

 

Protein sequence

MIRRVFLGSV MASVALCASD VQVLDEIVTI GTKSEKSVSE QTTKVEVITQ EAIENSGASN 
LSEVLNATPW LYVAPSGKSI SIRGMGHADT LLLIDGKRVN GEFSKTYELE RIPSGMIERI 
EVLKGSSSLL YGSDAMGGVI NIITKKPTKE DVSGNVQVMG GKDKESVDTF VSGRADKLSY 
SFYANYLNRD AYSKSKTADV KVMQAGIEKS PSALIGAGGW ASLRSNLANS YTISNNYTDN 
LETKTVGGSL AYEFSDFFRA YIEASYLEEK KDGLYISDSY ATNYKNGGNT IMAKYIPAHQ 
YDDNQRFNIA TGFDYTPSDA LHVKYNLAYS RYEKDRKVYT PLWSELGYAS IEASKSSLNV 
STLEYLTNDA QLTWTLDQNN RIVTGAEHRI HDVSSTAYDV DDRTYTGAFI QHEMTPLKKL 
HLVYGVRYDT TSTDEEETSL SVGATYDLLE RLKLRASYAQ GFRSPDDREL YVNQTNPNGK 
KILGATVIDT SVGKSSQYDL KSETSETFEV GFLTHGDAWM FDVAAFKTNI DDRISQVAYS 
NYTTFENISD SEIKGIEATF DVGLHETLWL QLGYNIQDAQ NKTAHTKLTD VPRRMASVSL 
SYTPIHNLEF RSTTKYIGEQ EGLEGEDVGG FSVTNVKVIA RELFKNTDVF AGVDNVFEKR 
TPEYLGLLPE FAYYVGFNYK F